RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TP53I3Q53FA7 332 aa14.85□□□□□ -0.03
USB1-213ENST00000566292 LHFPL4Q7Z7J7 247 aa14.85□□□□□ -0.03
USB1-213ENST00000566292 RDH10Q8IZV5 341 aa14.85□□□□□ -0.03
USB1-213ENST00000566292 DYNAPQ8N1N2 210 aa14.85□□□□□ -0.03
USB1-213ENST00000566292 GNG8Q9UK08 70 aa14.85□□□□□ -0.03
USB1-213ENST00000566292 LOC107986453A0A1B0GWG9 222 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 CHST1O43916 411 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 GATBO75879 557 aaKnown RBP14.84□□□□□ -0.03
USB1-213ENST00000566292 ATP6V1E1P36543 226 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 KIR2DS4P43632 304 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 EFNB2P52799 333 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 LGALS4P56470 323 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 SLC25A26Q70HW3 274 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 TCF23Q7RTU1 214 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 CCDC54Q8NEL0 328 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 RFKQ969G6 155 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 BORCS8Q96FH0 119 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 ADI1Q9BV57 179 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 IL36RNQ9UBH0 155 aa14.84□□□□□ -0.03
USB1-213ENST00000566292 TMEM82A0PJX8 343 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 ODF3BA8MYP8 253 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 UBCP0CG48 685 aaKnown RBP14.83□□□□□ -0.04
USB1-213ENST00000566292 ZNF728P0DKX0 622 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 EDDM3BP56851 147 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 CDC42P60953 191 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 LDLRAD2Q5SZI1 272 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 HIST2H2BDQ6DRA6 164 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 FAM220AQ7Z4H9 259 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 OR8H2Q8N162 312 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 FAM110DQ8TAY7 271 aaPredicted RBP14.83□□□□□ -0.04
USB1-213ENST00000566292 PYDC1Q8WXC3 89 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 C10orf35Q96D05 121 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 ADAT3Q96EY9 351 aaPredicted RBP14.83□□□□□ -0.04
USB1-213ENST00000566292 FOXJ3Q9UPW0 622 aa14.83□□□□□ -0.04
USB1-213ENST00000566292 IGKV1-9A0A0C4DH69 117 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 J3QRE1 110 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 SERPINA3P01011 423 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 HERPUD1Q15011 391 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 CNN3Q15417 329 aaKnown RBP14.82□□□□□ -0.04
USB1-213ENST00000566292 C2orf68Q2NKX9 166 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 GDPD3Q7L5L3 318 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 EGFL6Q8IUX8 553 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 OR4C13Q8NGP0 309 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 OR2G2Q8NGZ5 317 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 PP6455Q8WZ26 134 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 EMG1Q92979 244 aaKnown RBP14.82□□□□□ -0.04
USB1-213ENST00000566292 SNX22Q96L94 193 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 RANBP3Q9H6Z4 567 aaPredicted RBP14.82□□□□□ -0.04
USB1-213ENST00000566292 RAB18Q9NP72 206 aa14.82□□□□□ -0.04
USB1-213ENST00000566292 KIAA2026Q5HYC2 2103 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 VGLL3A8MV65 326 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 E9PQ18 207 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 ENTPD6O75354 484 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 CIB2O75838 187 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 HAND1O96004 215 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 IGHA1P01876 353 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 RBP4P02753 201 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 ARG1P05089 322 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 ALPLP05186 524 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 IGHV1-8P0DP01 117 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 NPBWR2P48146 333 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 NANOS3P60323 173 aaKnown RBP14.81□□□□□ -0.04
USB1-213ENST00000566292 PLA1AQ53H76 456 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 ZNF626Q68DY1 528 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 CCBE1Q6UXH8 406 aaPredicted RBP14.81□□□□□ -0.04
USB1-213ENST00000566292 LIAT1Q6ZQX7 453 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 DNAAF1Q8NEP3 725 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 OR52N4Q8NGI2 321 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 TRUB1Q8WWH5 349 aaKnown RBP14.81□□□□□ -0.04
USB1-213ENST00000566292 HRASLS5Q96KN8 279 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 RBFOX1Q9NWB1 397 aaKnown RBP14.81□□□□□ -0.04
USB1-213ENST00000566292 FRRS1LQ9P0K9 344 aa14.81□□□□□ -0.04
USB1-213ENST00000566292 TBL2Q9Y4P3 447 aaKnown RBP14.81□□□□□ -0.04
USB1-213ENST00000566292 CSF1P09603 554 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 BCL3P20749 454 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 POU3F4P49335 361 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 RBP2P50120 134 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 RAB13P51153 203 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 ATP1B3P54709 279 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 OR12D2P58182 307 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 ZNF91Q05481 1191 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 MEF2CQ06413 473 aaPredicted RBP14.8□□□□□ -0.04
USB1-213ENST00000566292 EDDM3AQ14507 147 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 TMEM244Q5VVB8 128 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 FDX2Q6P4F2 183 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 Q6ZTK2 550 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 KLHDC1Q8N7A1 406 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 TPRX1Q8N7U7 411 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 OR11H6Q8NGC7 330 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 OR13D1Q8NGV5 346 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 OR2T6Q8NHC8 308 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 RNFT2Q96EX2 444 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 ZNF714Q96N38 554 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 CHST6Q9GZX3 395 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 SEBOXQ9HB31 216 aaPredicted RBP14.8□□□□□ -0.04
USB1-213ENST00000566292 IMPAD1Q9NX62 359 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 TCF19Q9Y242 345 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 PLXNB1O43157 2135 aa14.8□□□□□ -0.04
USB1-213ENST00000566292 TRBV2A0A0J9YWF9 115 aa14.79□□□□□ -0.04
USB1-213ENST00000566292 H3BNX3 289 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms