RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 ADI1Q9BV57 179 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 PPA2Q9H2U2 334 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 SEBOXQ9HB31 216 aaPredicted RBP12.72□□□□□ -0.37
CDH3-204ENST00000565453 TMEM82A0PJX8 343 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 FAM90A8PA6NJQ4 464 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 M0QZ24 198 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 PIPP12273 146 aaPredicted RBP12.71□□□□□ -0.37
CDH3-204ENST00000565453 COX7A1P24310 79 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 NANOS3P60323 173 aaKnown RBP12.71□□□□□ -0.37
CDH3-204ENST00000565453 KPNB1Q14974 876 aaKnown RBP12.71□□□□□ -0.37
CDH3-204ENST00000565453 CNN3Q15417 329 aaKnown RBP12.71□□□□□ -0.37
CDH3-204ENST00000565453 TMEM244Q5VVB8 128 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 SLC25A26Q70HW3 274 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 TCF23Q7RTU1 214 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 KCTD20Q7Z5Y7 419 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 ASCC1Q8N9N2 400 aaKnown RBP12.71□□□□□ -0.37
CDH3-204ENST00000565453 DNAAF1Q8NEP3 725 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 PPP1R35Q8TAP8 253 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 PIFOQ8TCI5 191 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 MBOAT4Q96T53 435 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 IMPAD1Q9NX62 359 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 FRRS1LQ9P0K9 344 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 IL36RNQ9UBH0 155 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 FBLN5Q9UBX5 448 aa12.71□□□□□ -0.37
CDH3-204ENST00000565453 hCG_1809904A0A1W2PP81 198 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 A0A1W2PPE2 198 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 A0A1W2PR64 198 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 A0A1W2PRV1 198 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 ODF3BA8MYP8 253 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 SLC16A6O15403 523 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 SERPINA3P01011 423 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 ISG15P05161 165 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 GABRB1P18505 474 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 ALDH3A2P51648 485 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 OR12D2P58182 307 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 ACTC1P68032 377 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 ACTA1P68133 377 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 LY6EQ16553 131 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 ZIK1Q3SY52 487 aaPredicted RBP12.7□□□□□ -0.38
CDH3-204ENST00000565453 MEDAGQ5VYS4 303 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 ZNF782Q6ZMW2 699 aaPredicted RBP12.7□□□□□ -0.38
CDH3-204ENST00000565453 UTS2BQ765I0 119 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 EGFL6Q8IUX8 553 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 OR8H2Q8N162 312 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 SNX22Q96L94 193 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 MMP27Q9H306 513 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 TCF7L1Q9HCS4 588 aa12.7□□□□□ -0.38
CDH3-204ENST00000565453 EXOGQ9Y2C4 368 aaKnown RBP12.7□□□□□ -0.38
CDH3-204ENST00000565453 DAPL1A0PJW8 107 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 INMTO95050 263 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 RBP4P02753 201 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 ZNF728P0DKX0 622 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 ATF1P18846 271 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 NPBWR2P48146 333 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 RBP2P50120 134 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 CCR9P51686 369 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 ATP1B3P54709 279 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 ZNF91Q05481 1191 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 LDLRAD2Q5SZI1 272 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 ZFP1Q6P2D0 407 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 LHFPL4Q7Z7J7 247 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 DYNAPQ8N1N2 210 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 CBR4Q8N4T8 237 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 OR52N4Q8NGI2 321 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 OR10AC1Q8NH08 325 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 EMG1Q92979 244 aaKnown RBP12.69□□□□□ -0.38
CDH3-204ENST00000565453 FGGYQ96C11 551 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 RBFOX1Q9NWB1 397 aaKnown RBP12.69□□□□□ -0.38
CDH3-204ENST00000565453 AASSQ9UDR5 926 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 ORC6Q9Y5N6 252 aa12.69□□□□□ -0.38
CDH3-204ENST00000565453 DSCAML1Q8TD84 2053 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 TRBV2A0A0J9YWF9 115 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 MEX3AA1L020 520 aaKnown RBP12.68□□□□□ -0.38
CDH3-204ENST00000565453 OR4C45A6NMZ5 311 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 VGLL3A8MV65 326 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 CHST1O43916 411 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 TSPAN15O95858 294 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 HAND1O96004 215 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 IGHA1P01876 353 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 BCL3P20749 454 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 AZGP1P25311 298 aaKnown RBP12.68□□□□□ -0.38
CDH3-204ENST00000565453 KIR2DS4P43632 304 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 EFNB2P52799 333 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 EDDM3BP56851 147 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 DEFA6Q01524 100 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 MEF2CQ06413 473 aaPredicted RBP12.68□□□□□ -0.38
CDH3-204ENST00000565453 ZNF626Q68DY1 528 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 GDPD3Q7L5L3 318 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 RNF144BQ7Z419 303 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 Q8IYB0 196 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 ENTHD1Q8IYW4 607 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 ACBD7Q8N6N7 88 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 OR11H6Q8NGC7 330 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 LGALS12Q96DT0 336 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 PELI1Q96FA3 418 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 SIGLEC9Q9Y336 463 aa12.68□□□□□ -0.38
CDH3-204ENST00000565453 PSPNO60542 156 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 HTR1AP08908 422 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 IGHV1-8P0DP01 117 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 PRKACBP22694 351 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms