RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 ZNF492Q9P255 531 aa2.22□□□□□ -2.05
CHD9-215ENST00000565442 INSIG2Q9Y5U4 225 aa2.22□□□□□ -2.05
CHD9-215ENST00000565442 C9JQL5 133 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 ZNF593O00488 134 aaPredicted RBP2.21□□□□□ -2.06
CHD9-215ENST00000565442 TCAPO15273 167 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 KCNK2O95069 426 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 VAPBO95292 243 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 FSTL3O95633 263 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 RLN2P04090 185 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 TAC1P20366 129 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 TEAD1P28347 426 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 SLC6A1P30531 599 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 ACOT2P49753 483 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 SLC18A1P54219 525 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 LINC00303Q3SY05 128 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 BRD3OSQ6XYD6 125 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 ADM2Q7Z4H4 148 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 OR6K2Q8NGY2 324 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 CDKL2Q92772 493 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 CIDECQ96AQ7 238 aaPredicted RBP2.21□□□□□ -2.06
CHD9-215ENST00000565442 LRRC39Q96DD0 335 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 PPP1R36Q96LQ0 422 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 SRRQ9GZT4 340 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 ASB7Q9H672 318 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 FAM60AQ9NP50 221 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 INIPQ9NRY2 104 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 VAPAQ9P0L0 249 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 ACOT9Q9Y305 439 aa2.21□□□□□ -2.06
CHD9-215ENST00000565442 IGKV3D-11A0A0A0MRZ8 115 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 LOC389332A0A1B0GUA5 103 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 A0A1W2PNN7 141 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 KLHL2O95198 593 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 SNRPAP09012 282 aaKnown RBP2.2□□□□□ -2.06
CHD9-215ENST00000565442 CCDC172P0C7W6 258 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 INAFM2P0DMQ5 153 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 ZNF35P13682 527 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 NUDT2P50583 147 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 FMODQ06828 376 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 BIKQ13323 160 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 ZNF235Q14590 738 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 FAHD1Q6P587 224 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 UGT2A3Q6UWM9 527 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 GAPTQ8N292 157 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 ZNF555Q8NEP9 628 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 OR4C13Q8NGP0 309 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 OR8K3Q8NH51 312 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 DOK4Q8TEW6 326 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 ZNF75CPQ92670 426 aaPredicted RBP2.2□□□□□ -2.06
CHD9-215ENST00000565442 VAT1Q99536 393 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 COPS4Q9BT78 406 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 THTPAQ9BU02 230 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 PRRG3Q9BZD7 231 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 PLA2G12AQ9BZM1 189 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 PRORYQ9H606 182 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 SDHAF3Q9NRP4 125 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 ZNF391Q9UJN7 358 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 ZNF706Q9Y5V0 76 aaPredicted RBP2.2□□□□□ -2.06
CHD9-215ENST00000565442 ADAMTSL3P82987 1691 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 AK9Q5TCS8 1911 aa2.2□□□□□ -2.06
CHD9-215ENST00000565442 GOLGA6L4A6NEF3 574 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 OR2AT4A6NND4 320 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 E7EWF7 191 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 NDUFS8O00217 210 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 RGS5O15539 181 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 IGHG2P01859 326 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 BGNP21810 368 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 COL8A2P25067 703 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 STX4Q12846 297 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 GUSBP1Q15486 140 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 SSX1Q16384 188 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 CEACAM16Q2WEN9 425 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 ZNF404Q494X3 552 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 SPIN3Q5JUX0 258 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 ACTL10Q5JWF8 245 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 CLLU1OSQ5K130 101 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 LDLRAD2Q5SZI1 272 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 LIN9Q5TKA1 542 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 RESP18Q5W5W9 173 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 TMEM144Q7Z5S9 345 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 LINC00596Q86U02 117 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 PDCL2Q8N4E4 241 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 OR2K2Q8NGT1 345 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 CLHC1Q8NHS4 586 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 UBA3Q8TBC4 463 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 GLT1D1Q96MS3 346 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 WDR55Q9H6Y2 383 aaPredicted RBP2.19□□□□□ -2.06
CHD9-215ENST00000565442 TRIM45Q9H8W5 580 aaPredicted RBP2.19□□□□□ -2.06
CHD9-215ENST00000565442 TAC3Q9UHF0 121 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 ZNF229Q9UJW7 825 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 RBMX2Q9Y388 322 aaKnown RBP2.19□□□□□ -2.06
CHD9-215ENST00000565442 ZNF780BQ9Y6R6 833 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 SHROOM3Q8TF72 1996 aa2.19□□□□□ -2.06
CHD9-215ENST00000565442 KIR2DS1A0A191URI9 304 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 RAB19A4D1S5 217 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 IGLL5B9A064 214 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 IGLV6-57P01721 117 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 CD8AP01732 235 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 HRES1P13985 223 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 CCNOP22674 350 aa2.18□□□□□ -2.06
CHD9-215ENST00000565442 CD34P28906 385 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms