RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 H7C1Q1 480 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 SGCEO43556 437 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 GPR137BO60478 399 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 ZIC3O60481 467 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 TSPAN15O95858 294 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 SEC11BP0C7V7 166 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 CHATP28329 748 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 KCNJ3P48549 501 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 SP6Q3SY56 376 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 ASCL4Q6XD76 172 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 LHFPL2Q6ZUX7 228 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 ZFP82Q8N141 532 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 COMMD1Q8N668 190 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 C15orf54Q8N8G6 183 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 LRTM2Q8N967 370 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 C2CD4CQ8TF44 421 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 SECTM1Q8WVN6 248 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 ZNF837Q96EG3 531 aaPredicted RBP6.31□□□□□ -1.4
SMG1-210ENST00000565224 BORCS8Q96FH0 119 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 JSRP1Q96MG2 331 aaPredicted RBP6.31□□□□□ -1.4
SMG1-210ENST00000565224 OCIAD1Q9NX40 245 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 ZNF581Q9P0T4 197 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 TIMM10BQ9Y5J6 103 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 GVINP1Q7Z2Y8 2422 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 A0A0J9YW62 118 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 G3V3Y1 287 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 TERTO14746 1132 aaKnown RBP6.31□□□□□ -1.4
SMG1-210ENST00000565224 TNFSF11O14788 317 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 SYNGR3O43761 229 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 CST2P09228 141 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 DANCRP0C864 163 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 HOXB1P14653 301 aaPredicted RBP6.31□□□□□ -1.4
SMG1-210ENST00000565224 P2RY1P47900 373 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 RBP2P50120 134 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 PPT1P50897 306 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 SSR4P51571 173 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 STARD6P59095 220 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 FXYD4P59646 89 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 RAB5BP61020 215 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 RAC1P63000 192 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 EXT1Q16394 746 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 MIDNQ504T8 468 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 GPR157Q5UAW9 335 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 ZNF774Q6NX45 483 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 LIAT1Q6ZQX7 453 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 LYZL2Q7Z4W2 148 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 GPR137CQ8N3F9 429 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 OR1F12Q8NHA8 337 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 C14orf79Q96F83 325 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 BSCL2Q96G97 398 aaPredicted RBP6.31□□□□□ -1.4
SMG1-210ENST00000565224 MARS2Q96GW9 593 aaKnown RBP6.31□□□□□ -1.4
SMG1-210ENST00000565224 C18orf12Q96KH6 178 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 GINS3Q9BRX5 216 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 COL25A1Q9BXS0 654 aaPredicted RBP6.31□□□□□ -1.4
SMG1-210ENST00000565224 SRXN1Q9BYN0 137 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 PROK2Q9HC23 129 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 LUZP4Q9P127 313 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 MED12Q93074 2177 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 ASCC3Q8N3C0 2202 aaKnown RBP6.3□□□□□ -1.4
SMG1-210ENST00000565224 GJE1A6NN92 205 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 GEMIN2O14893 280 aaKnown RBP6.3□□□□□ -1.4
SMG1-210ENST00000565224 XRCC2O43543 280 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 NME2P1O60361 137 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 ZNF205O95201 554 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 DIRAS3O95661 229 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 LCATP04180 440 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 FGF5P12034 268 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 COX6A1P12074 109 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 DUSP1P28562 367 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 SNCAP37840 140 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 MEOX2P50222 304 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 UCP2P55851 309 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 HGFACQ04756 655 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 ZNF616Q08AN1 781 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 HABP2Q14520 560 aaPredicted RBP6.3□□□□□ -1.4
SMG1-210ENST00000565224 PHLDA2Q53GA4 152 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 AKIRIN2Q53H80 203 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 TSPO2Q5TGU0 170 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 TMEM42Q69YG0 159 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 SLC22A25Q6T423 547 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 CLEC9AQ6UXN8 241 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 LGI3Q8N145 548 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 OSR2Q8N2R0 312 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 KDF1Q8NAX2 398 aaPredicted RBP6.3□□□□□ -1.4
SMG1-210ENST00000565224 OR10AD1Q8NGE0 317 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 SFT2D1Q8WV19 159 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 DYRK2Q92630 601 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 IMMP1LQ96LU5 166 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 CLCC1Q96S66 551 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 SF3B5Q9BWJ5 86 aaKnown RBP6.3□□□□□ -1.4
SMG1-210ENST00000565224 EGLN1Q9GZT9 426 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 PARP12Q9H0J9 701 aaKnown RBP6.3□□□□□ -1.4
SMG1-210ENST00000565224 ZNF700Q9H0M5 742 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 BCO1Q9HAY6 547 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 ZNF286AQ9HBT8 521 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 WFDC1Q9HC57 220 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 SH2D2AQ9NP31 389 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 SLC2A9Q9NRM0 540 aa6.3□□□□□ -1.4
SMG1-210ENST00000565224 PTPRZ1P23471 2315 aaPredicted RBP6.3□□□□□ -1.4
SMG1-210ENST00000565224 IGKV1-12A0A0C4DH73 117 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms