RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 ZNF788Q6ZQV5 615 aa13.64□□□□□ -0.23
USB1-206ENST00000562534 LRRTM1Q86UE6 522 aa13.64□□□□□ -0.23
USB1-206ENST00000562534 JAGN1Q8N5M9 183 aa13.64□□□□□ -0.23
USB1-206ENST00000562534 EMG1Q92979 244 aaKnown RBP13.64□□□□□ -0.23
USB1-206ENST00000562534 SMR3AQ99954 134 aa13.64□□□□□ -0.23
USB1-206ENST00000562534 SSBP3Q9BWW4 388 aaPredicted RBP13.64□□□□□ -0.23
USB1-206ENST00000562534 METTL9Q9H1A3 318 aa13.64□□□□□ -0.23
USB1-206ENST00000562534 HMG20AQ9NP66 347 aa13.64□□□□□ -0.23
USB1-206ENST00000562534 CLN8Q9UBY8 286 aa13.64□□□□□ -0.23
USB1-206ENST00000562534 STUB1Q9UNE7 303 aa13.64□□□□□ -0.23
USB1-206ENST00000562534 ING4Q9UNL4 249 aa13.64□□□□□ -0.23
USB1-206ENST00000562534 GSTK1Q9Y2Q3 226 aa13.64□□□□□ -0.23
USB1-206ENST00000562534 POLR3KQ9Y2Y1 108 aaPredicted RBP13.64□□□□□ -0.23
USB1-206ENST00000562534 YLPM1P49750 1951 aaKnown RBP13.63□□□□□ -0.23
USB1-206ENST00000562534 CR1P17927 2039 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 IGKV1D-17A0A075B6S4 117 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 TRAV1-2A0A0B4J238 106 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 TRAV20A0A0B4J274 112 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 IGKV1-12A0A0C4DH73 117 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 NKX6-3A6NJ46 265 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 F8VVB4 439 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 F8VWA3 439 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 NDUFB3O43676 98 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 IGKV1D-12P01611 117 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 CHRM2P08172 466 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 CD37P11049 281 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 CD36P16671 472 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 CALRP27797 417 aaKnown RBP13.63□□□□□ -0.23
USB1-206ENST00000562534 MTNR1BP49286 362 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 DVL1P1P54792 670 aaPredicted RBP13.63□□□□□ -0.23
USB1-206ENST00000562534 IL13RA1P78552 427 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 SPIN3Q5JUX0 258 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 WDR25Q64LD2 544 aaPredicted RBP13.63□□□□□ -0.23
USB1-206ENST00000562534 ELP2Q6IA86 826 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 FAM166AQ6J272 317 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 C1QL2Q7Z5L3 287 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 ZNF561Q8N587 486 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 SDSLQ96GA7 329 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 FAM192AQ9GZU8 254 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 CNTD2Q9H8S5 307 aa13.63□□□□□ -0.23
USB1-206ENST00000562534 ELL3Q9HB65 397 aaPredicted RBP13.63□□□□□ -0.23
USB1-206ENST00000562534 HIVEP1P15822 2718 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 PPIAL4CA0A0B4J2A2 164 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 A8MXK9 166 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 PDCD5O14737 125 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 SH2D1BO14796 132 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 SIGLEC5O15389 551 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 ECDO95905 644 aaPredicted RBP13.62□□□□□ -0.23
USB1-206ENST00000562534 CSTBP04080 98 aaKnown RBP13.62□□□□□ -0.23
USB1-206ENST00000562534 SFTPBP07988 381 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 ADRA2CP18825 462 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 AMY2BP19961 511 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 GATA3P23771 443 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 OR3A4PP47883 348 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 LCN2P80188 198 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 KRTAP1-1Q07627 177 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 ZNF146Q15072 292 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 LRRC10Q5BKY1 277 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 GDPGP1Q6ZNW5 385 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 GLCCI1Q86VQ1 547 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 LYPD6Q86Y78 171 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 BATF2Q8N1L9 274 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 Q8NFD4 153 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 TMEM186Q96B77 213 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 GSX1Q9H4S2 264 aaPredicted RBP13.62□□□□□ -0.23
USB1-206ENST00000562534 EXOSC4Q9NPD3 245 aaKnown RBP13.62□□□□□ -0.23
USB1-206ENST00000562534 RBFOX1Q9NWB1 397 aaKnown RBP13.62□□□□□ -0.23
USB1-206ENST00000562534 IL36GQ9NZH8 169 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 CTSZQ9UBR2 303 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 GHRLQ9UBU3 117 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 ZNF222Q9UK12 451 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 MED13LQ71F56 2210 aa13.62□□□□□ -0.23
USB1-206ENST00000562534 FLNAP21333 2647 aaKnown RBP13.61□□□□□ -0.23
USB1-206ENST00000562534 A8MV72 311 aaPredicted RBP13.61□□□□□ -0.23
USB1-206ENST00000562534 DVL1O14640 695 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 PHF1O43189 567 aaPredicted RBP13.61□□□□□ -0.23
USB1-206ENST00000562534 PRKACAP17612 351 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 MYL9P24844 172 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 ZFP36P26651 326 aaKnown RBP13.61□□□□□ -0.23
USB1-206ENST00000562534 FGF12P61328 243 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 SEC61A1P61619 476 aaKnown RBP13.61□□□□□ -0.23
USB1-206ENST00000562534 TIMM50Q3ZCQ8 353 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 C1orf100Q5SVJ3 147 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 CD177Q8N6Q3 437 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 GAFA1Q96PS6 74 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 MRPS26Q9BYN8 205 aaKnown RBP13.61□□□□□ -0.23
USB1-206ENST00000562534 LPAR2Q9HBW0 351 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 YAE1D1Q9NRH1 226 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 HIF1ANQ9NWT6 349 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 TXNL4BQ9NX01 149 aaKnown RBP13.61□□□□□ -0.23
USB1-206ENST00000562534 OR14J1Q9UGF5 321 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 OR5V1Q9UGF6 321 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 KCNS2Q9ULS6 477 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 MRPS28Q9Y2Q9 187 aaKnown RBP13.61□□□□□ -0.23
USB1-206ENST00000562534 MAB21L2Q9Y586 359 aa13.61□□□□□ -0.23
USB1-206ENST00000562534 ACANP16112 2415 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 LOC105371242A0A075B767 164 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 CDRT1O95170 752 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 HTR3BO95264 441 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 LIPFP07098 398 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms