RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 GAR1Q9NY12 217 aaKnown RBP7.99□□□□□ -1.13
TPM1-225ENST00000560679 CLEC2DQ9UHP7 191 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 CYB5R1Q9UHQ9 305 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 EXOSC1Q9Y3B2 195 aaKnown RBP7.99□□□□□ -1.13
TPM1-225ENST00000560679 SF3B6Q9Y3B4 125 aaKnown RBP7.99□□□□□ -1.13
TPM1-225ENST00000560679 U3KQK5 164 aa7.99□□□□□ -1.13
TPM1-225ENST00000560679 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.98□□□□□ -1.13
TPM1-225ENST00000560679 LOC100506127A0A0U1RQW1 187 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 A0A1W2PQ09 198 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 METTL15A6NJ78 407 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 C3orf84H3BNL1 204 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 TXNDC12O95881 172 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 MYL12AP19105 171 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 CENPAP49450 140 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 TPTEP56180 551 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 MLLT11Q13015 90 aaPredicted RBP7.98□□□□□ -1.13
TPM1-225ENST00000560679 DOC2BQ14184 412 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 CNN3Q15417 329 aaKnown RBP7.98□□□□□ -1.13
TPM1-225ENST00000560679 SPHARQ15513 63 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 SSX1Q16384 188 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 ZNF788Q6ZQV5 615 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 TMEM219Q86XT9 240 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 GID4Q8IVV7 300 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 MKXQ8IYA7 352 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 OR6V1Q8N148 313 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 MFSD4AQ8N468 514 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 OR1M1Q8NGA1 313 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 OR9Q1Q8NGQ5 310 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 CHCHD6Q9BRQ6 235 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 SLIRPQ9GZT3 109 aaKnown RBP7.98□□□□□ -1.13
TPM1-225ENST00000560679 TLNRD1Q9H1K6 362 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 OR51E2Q9H255 320 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 FN3KQ9H479 309 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 ISYNA1Q9NPH2 558 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 SNTG1Q9NSN8 517 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 C14orf119Q9NWQ9 140 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 MRPL22Q9NWU5 206 aaKnown RBP7.98□□□□□ -1.13
TPM1-225ENST00000560679 CHCHD3Q9NX63 227 aaKnown RBP7.98□□□□□ -1.13
TPM1-225ENST00000560679 SLC25A10Q9UBX3 287 aaPredicted RBP7.98□□□□□ -1.13
TPM1-225ENST00000560679 B9D1Q9UPM9 204 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 BAIAP2Q9UQB8 552 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 TCF19Q9Y242 345 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 IER3IP1Q9Y5U9 82 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 A3GALT2U3KPV4 340 aa7.98□□□□□ -1.13
TPM1-225ENST00000560679 A6NDX4 124 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 NKX6-3A6NJ46 265 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 J3QRK9 145 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 SIGLEC5O15389 551 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 SYNGR1O43759 233 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 PTP4A3O75365 173 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 NDUFB2O95178 105 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 PF4P02776 101 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 FAHP16930 419 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 HTR1FP30939 366 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 TGFBR1P36897 503 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 RPS27P42677 84 aaKnown RBP7.97□□□□□ -1.13
TPM1-225ENST00000560679 ETV1P50549 477 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 RAB13P51153 203 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 CAV3P56539 151 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 GMFBP60983 142 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 PLA1AQ53H76 456 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 NXNL2Q5VZ03 156 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 DNM1P34Q6PK57 102 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 SMARCD3Q6STE5 483 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 DPY19L4Q7Z388 723 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 RNF144BQ7Z419 303 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 LHFPL4Q7Z7J7 247 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 LINC00482Q8N8I6 264 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 DTX3Q8N9I9 347 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 OR5D13Q8NGL4 314 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 MCFD2Q8NI22 146 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 ANGPTL6Q8NI99 470 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 JAM3Q9BX67 310 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 NXF2Q9GZY0 626 aaKnown RBP7.97□□□□□ -1.13
TPM1-225ENST00000560679 DNTTIP1Q9H147 329 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 C19orf12Q9NSK7 152 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 NDUFB11Q9NX14 153 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 HAO2Q9NYQ3 351 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 ZNF391Q9UJN7 358 aa7.97□□□□□ -1.13
TPM1-225ENST00000560679 EXOGQ9Y2C4 368 aaKnown RBP7.97□□□□□ -1.13
TPM1-225ENST00000560679 FAM90A8PA6NJQ4 464 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 RIIAD1A6NNX1 92 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 CDIPTO14735 213 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 GPX5O75715 221 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 DUS4LO95620 317 aaKnown RBP7.96□□□□□ -1.14
TPM1-225ENST00000560679 IGHA1P01876 353 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 SLC2A1P11166 492 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 NDUFB7P17568 137 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 CRABP1P29762 137 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 SLC6A6P31641 620 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 VDAC2P45880 294 aaPredicted RBP7.96□□□□□ -1.14
TPM1-225ENST00000560679 WNT4P56705 351 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 BLCAPP62952 87 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 MZT1Q08AG7 82 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 TMED1Q13445 227 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 LDLRAD2Q5SZI1 272 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 CASC10Q5T4H9 136 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 ETV3LQ6ZN32 361 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 CPOQ8IVL8 374 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 C11orf42Q8N5U0 333 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms