RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LPAR3Q9UBY5 353 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 V9GYH0 126 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.71□□□□□ -0.545e-6■□□□□ 9.9
PKNOX1-209ENST00000560448 ZNF879B4DU55 563 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 WNT9BO14905 357 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 GPR37O15354 613 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 LMX1BO60663 402 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 UPK1BO75841 260 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 ARL6IP5O75915 188 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 TGFAP01135 160 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 WNT2P09544 360 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 ATF1P18846 271 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 IL2RGP31785 369 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 DDI2Q5TDH0 399 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 ZNF826PQ6ZT77 177 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 POC1AQ8NBT0 407 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 OR51A4Q8NGJ6 313 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 ACOT12Q8WYK0 555 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 TMEM186Q96B77 213 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 CEP19Q96LK0 163 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 SMR3AQ99954 134 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 SOSTQ9BQB4 213 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 GSX1Q9H4S2 264 aaPredicted RBP11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 PPP1R3EQ9H7J1 279 aa11.7□□□□□ -0.54
PKNOX1-209ENST00000560448 MAGEB3O15480 346 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 RGS5O15539 181 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 SULT1B1O43704 296 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 CYB5AP00167 134 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 GLRA1P23415 457 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 AZGP1P25311 298 aaKnown RBP11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 OR10A3P58181 314 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 PPP3R1P63098 170 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 ZNF79Q15937 498 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 SMIM21Q3B7S5 101 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 Q499Y3 187 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 ATPAF1Q5TC12 328 aaPredicted RBP11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 SLC36A1Q7Z2H8 476 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 MKXQ8IYA7 352 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 TMEM106AQ96A25 262 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 KCTD12Q96CX2 325 aaKnown RBP11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 DMRTB1Q96MA1 342 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 DERL3Q96Q80 235 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 FGF23Q9GZV9 251 aaPredicted RBP11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 NOX4Q9NPH5 578 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 CKLFQ9UBR5 152 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 DNAJB11Q9UBS4 358 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 HIVEP2P31629 2446 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 TRBV5-7A0A0A0MS05 114 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 A0A0G2JMP0 313 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 A0A0X1KG70 313 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 FAM230AA0A1W2PPH8 454 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 A0A1W2PPK0 400 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 FAM157AC9JC47 383 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 J3QLI3 93 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 PGA5P0DJD9 388 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 ZNF16P17020 682 aaPredicted RBP11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 RAB3AP20336 220 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 RAB3BP20337 219 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 HNF1AP20823 631 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 MTCP1P56278 107 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 GNB2P62879 340 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 RGS21Q2M5E4 152 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 HSD17B12Q53GQ0 312 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 CD276Q5ZPR3 534 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 ZNF529Q6P280 563 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 SFXN4Q6P4A7 337 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 MZT2AQ6P582 158 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 LYSMD2Q8IV50 215 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 CENPSQ8N2Z9 138 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 OR4M2Q8NGB6 313 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 OR10AC1Q8NH08 325 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 CCDC32Q9BV29 185 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 SSBP3Q9BWW4 388 aaPredicted RBP11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 SRRQ9GZT4 340 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 YAE1D1Q9NRH1 226 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 NLKQ9UBE8 527 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 COMMD3Q9UBI1 195 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 CLN8Q9UBY8 286 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 OR5V1Q9UGF6 321 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 CDC42EP3Q9UKI2 254 aa11.69□□□□□ -0.54
PKNOX1-209ENST00000560448 CSPG4Q6UVK1 2322 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 IGKV1-9A0A0C4DH69 117 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 A6NIN4 97 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 NKX6-3A6NJ46 265 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 C3orf80F5H4A9 247 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 TNFRSF13BO14836 293 aaPredicted RBP11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 HPGDSO60760 199 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 ALDOBP05062 364 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 SRMP19623 302 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 FSTP19883 344 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 OXA1LQ15070 435 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 IDNKQ5T6J7 187 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 STUMQ69YW2 141 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 SFRP4Q6FHJ7 346 aaPredicted RBP11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 FIP1L1Q6UN15 594 aaKnown RBP11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 SAXO1Q8IYX7 474 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 TRMT10AQ8TBZ6 339 aaKnown RBP11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 MED30Q96HR3 178 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 GFI1Q99684 422 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 NRIP2Q9BQI9 281 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms