RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TET2Q6N021 2002 aaPredicted RBP4.72□□□□□ -1.65
USP3-215ENST00000559771 PLXNB1O43157 2135 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 A0A075B6Q4 140 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 A0A1B0GVI7 797 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 A0A1W2PRD5 423 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 A0A1W2PRF3 423 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 A0A1W2PRM7 423 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 hCG_1807616A0A1W2PRN6 198 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 A6NLC8 198 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 G3V4G9 280 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 H3BS24 57 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 CCRL2O00421 344 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 CDIPTO14735 213 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 NPFFO15130 113 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 FADS2O95864 444 aaKnown RBP4.72□□□□□ -1.65
USP3-215ENST00000559771 SPARCP09486 303 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 SPI1P17947 270 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 PSMA1P25786 263 aaKnown RBP4.72□□□□□ -1.65
USP3-215ENST00000559771 PAX6P26367 422 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 DCTDP32321 178 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 S100A5P33763 92 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 TGFBR2P37173 567 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 DDOSTP39656 456 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 ETV6P41212 452 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 CX3CR1P49238 355 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 SLC25A1P53007 311 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 PPP5CP53041 499 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 EGR3Q06889 387 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 TMED1Q13445 227 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 SPCS2Q15005 226 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 FAM76BQ5HYJ3 339 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 KPRPQ5T749 579 aaPredicted RBP4.72□□□□□ -1.65
USP3-215ENST00000559771 ZBTB37Q5TC79 503 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 RPL13AP3Q6NVV1 102 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 ZNF788Q6ZQV5 615 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 KRT74Q7RTS7 529 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 C11orf42Q8N5U0 333 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 SPERTQ8NA61 448 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 SCCPDHQ8NBX0 429 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 OR2T4Q8NH00 348 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 ANGPTL6Q8NI99 470 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 FAM110DQ8TAY7 271 aaPredicted RBP4.72□□□□□ -1.65
USP3-215ENST00000559771 PIFOQ8TCI5 191 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 RNF133Q8WVZ7 376 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 HPSE2Q8WWQ2 592 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 CFHR4Q92496 578 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 SGCDQ92629 289 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 RFKQ969G6 155 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 TMEM80Q96HE8 168 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 REEP6Q96HR9 211 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 LYZL4Q96KX0 146 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 ABHD6Q9BV23 337 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 MND1Q9BWT6 205 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 MROQ9BYG7 248 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 SLIRPQ9GZT3 109 aaKnown RBP4.72□□□□□ -1.65
USP3-215ENST00000559771 DCSTAMPQ9H295 470 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 DPAGT1Q9H3H5 408 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 MED20Q9H944 212 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 TCF7L1Q9HCS4 588 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 TRIM36Q9NQ86 728 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 SNTG1Q9NSN8 517 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 CENPMQ9NSP4 180 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 CHCHD3Q9NX63 227 aaKnown RBP4.72□□□□□ -1.65
USP3-215ENST00000559771 ONECUT1Q9UBC0 465 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 DNAJB11Q9UBS4 358 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 ZNF222Q9UK12 451 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.72□□□□□ -1.65
USP3-215ENST00000559771 NOP16Q9Y3C1 178 aaKnown RBP4.72□□□□□ -1.65
USP3-215ENST00000559771 RHBDD3Q9Y3P4 386 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 N6AMT1Q9Y5N5 214 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 PEX16Q9Y5Y5 336 aa4.72□□□□□ -1.65
USP3-215ENST00000559771 IGKV1D-17A0A075B6S4 117 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 A0A1B0GVG6 124 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 ANKRD30BLA7E2S9 258 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 ZNF878C9JN71 531 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 H3BN98 237 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 TBX1O43435 398 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 XRCC2O43543 280 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 CHST1O43916 411 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 RHBDL1O75783 438 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 PRB2P02812 416 aaPredicted RBP4.71□□□□□ -1.66
USP3-215ENST00000559771 HMGN1P05114 100 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 FBP1P09467 338 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 OCM2P0CE71 109 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 OCMP0CE72 109 aaPredicted RBP4.71□□□□□ -1.66
USP3-215ENST00000559771 GALP22466 123 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 C21orf33P30042 268 aaPredicted RBP4.71□□□□□ -1.66
USP3-215ENST00000559771 SAA4P35542 130 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 OPRL1P41146 370 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 MAP2K4P45985 399 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 UBE2E1P51965 193 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 EFNB2P52799 333 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 ZNF121P58317 390 aaPredicted RBP4.71□□□□□ -1.66
USP3-215ENST00000559771 ERVFRD-1P60508 538 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 EFNB1P98172 346 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 CDK5Q00535 292 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 RAB40BQ12829 278 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 MLLT11Q13015 90 aaPredicted RBP4.71□□□□□ -1.66
USP3-215ENST00000559771 OXA1LQ15070 435 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 SPHARQ15513 63 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms