RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 CTSZQ9UBR2 303 aa8.04□□□□□ -1.12
SPG11-214ENST00000558989 CLN8Q9UBY8 286 aa8.04□□□□□ -1.12
SPG11-214ENST00000558989 MIOXQ9UGB7 285 aa8.04□□□□□ -1.12
SPG11-214ENST00000558989 MPC1Q9Y5U8 109 aa8.04□□□□□ -1.12
SPG11-214ENST00000558989 MXRA5Q9NR99 2828 aa8.04□□□□□ -1.12
SPG11-214ENST00000558989 A0A0U1RQV5 110 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 MEGF11A6BM72 1044 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 F8WDY8 70 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 J3QLW9 94 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 LGALS8O00214 317 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 RHBDL1O75783 438 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 SCAF4O95104 1147 aaKnown RBP8.03□□□□□ -1.12
SPG11-214ENST00000558989 CST4P01036 141 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 ZNF19P17023 458 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 OR12D2P58182 307 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 SNRPGP62308 76 aaKnown RBP8.03□□□□□ -1.12
SPG11-214ENST00000558989 SMN1Q16637 294 aaKnown RBP8.03□□□□□ -1.12
SPG11-214ENST00000558989 KRTAP21-3Q3LHN1 58 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 DCDC5Q6ZRR9 648 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 TRUB1Q8WWH5 349 aaKnown RBP8.03□□□□□ -1.12
SPG11-214ENST00000558989 RORBQ92753 470 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 LGALS12Q96DT0 336 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 CCL13Q99616 98 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 FAM212BQ9NTI7 297 aaPredicted RBP8.03□□□□□ -1.12
SPG11-214ENST00000558989 DNAJB11Q9UBS4 358 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 ENPP5Q9UJA9 477 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 MYRFQ9Y2G1 1151 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 TRAV38-1A0A0B4J264 116 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 A0A1B0GVI7 797 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 FAM230AA0A1W2PPH8 454 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 SPRY1O43609 319 aaPredicted RBP8.03□□□□□ -1.12
SPG11-214ENST00000558989 CIDEAO60543 219 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 DHRS3O75911 302 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 NRASP01111 189 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 DCTDP32321 178 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 ZNF91Q05481 1191 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 IKZF1Q13422 519 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 WDR38Q5JTN6 314 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 MEDAGQ5VYS4 303 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 WDR25Q64LD2 544 aaPredicted RBP8.03□□□□□ -1.12
SPG11-214ENST00000558989 CATSPERDQ86XM0 798 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 PRSS35Q8N3Z0 413 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 CNIH3Q8TBE1 160 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 ZNF488Q96MN9 340 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 PLEKHA1Q9HB21 404 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 OPN4Q9UHM6 478 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 AUP1Q9Y679 476 aa8.03□□□□□ -1.12
SPG11-214ENST00000558989 A0A1B0GTI1 187 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 DLGAP1O14490 977 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 SYT7O43581 403 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 MPIG6BO95866 241 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 DBTP11182 482 aaKnown RBP8.02□□□□□ -1.13
SPG11-214ENST00000558989 BMI1P35226 326 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 KIR3DL2P43630 455 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 SNCBQ16143 134 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 MICBQ29980 383 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 ARMCX4Q5H9R4 360 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 ZNF684Q5T5D7 378 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 HAGHLQ6PII5 290 aaPredicted RBP8.02□□□□□ -1.13
SPG11-214ENST00000558989 BTNL3Q6UXE8 466 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 FAM216BQ8N7L0 139 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 OR14K1Q8NGZ2 314 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 NANPQ8TBE9 248 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 ABHD5Q8WTS1 349 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 C4orf36Q96KX1 117 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 SSX3Q99909 188 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 MRI1Q9BV20 369 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 MOB1AQ9H8S9 216 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 TMEM140Q9NV12 185 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 ERVK-18Q9QC07 812 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 ZNF391Q9UJN7 358 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 INSIG2Q9Y5U4 225 aa8.02□□□□□ -1.13
SPG11-214ENST00000558989 SOX21Q9Y651 276 aaPredicted RBP8.02□□□□□ -1.13
SPG11-214ENST00000558989 TRBV2A0A0J9YWF9 115 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 MFSD2BA6NFX1 497 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 SNTNA6NMZ2 147 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 E9PQ18 207 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 LHBP01229 141 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 IGLV3-1P01715 115 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 HTR1AP08908 422 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 AREGP15514 252 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 ZNF12P17014 697 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 PRKACBP22694 351 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 GLRA1P23415 457 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 PTBP1P26599 531 aaKnown RBP eCLIP8.01□□□□□ -1.13
SPG11-214ENST00000558989 HAAOP46952 286 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 GABRA2P47869 451 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 GNG3P63215 75 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 KCNJ8Q15842 424 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 CEACAM21Q3KPI0 293 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 C19orf54Q5BKX5 351 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 ZNF841Q6ZN19 808 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 DOK3Q7L591 496 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 ANGPTL5Q86XS5 388 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 SLC24A4Q8NFF2 622 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 RHOXF1Q8NHV9 184 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 APH1BQ8WW43 257 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 SLC6A7Q99884 636 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 ALG8Q9BVK2 526 aa8.01□□□□□ -1.13
SPG11-214ENST00000558989 ISG20L2Q9H9L3 353 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms