RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 UPK1BO75841 260 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 OR2J2O76002 312 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 VAMP5O95183 116 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 UMODP07911 640 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 ADRA2AP08913 450 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 OCM2P0CE71 109 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 OCMP0CE72 109 aaPredicted RBP4.37□□□□□ -1.71
SRP54-211ENST00000556445 COX6A1P12074 109 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 EDNRAP25101 427 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 CD82P27701 267 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 GRPRP30550 384 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 PYCR1P32322 319 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 ACVR1BP36896 505 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 PSMD7P51665 324 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 DSCR4P56555 118 aaPredicted RBP4.37□□□□□ -1.71
SRP54-211ENST00000556445 CLDN18P56856 261 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 FBXW4P57775 412 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 MLF1P58340 268 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 FABP5Q01469 135 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 ZNF85Q03923 595 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 GLO1Q04760 184 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 LTBQ06643 244 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 SELENBP1Q13228 472 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 TOMM34Q15785 309 aaPredicted RBP4.37□□□□□ -1.71
SRP54-211ENST00000556445 MRPL23Q16540 153 aaKnown RBP4.37□□□□□ -1.71
SRP54-211ENST00000556445 LPAL2Q16609 132 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 THEM4Q5T1C6 240 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 EEF1A1P5Q5VTE0 462 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 DMKNQ6E0U4 476 aaPredicted RBP4.37□□□□□ -1.71
SRP54-211ENST00000556445 OR4A47Q6IF82 309 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 XKRXQ6PP77 449 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 PLCZ1Q86YW0 608 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 FGFRL1Q8N441 504 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 TMEM156Q8N614 296 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 GDPD1Q8N9F7 314 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 TMEM104Q8NE00 496 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 OR2AK2Q8NG84 335 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 OR11G2Q8NGC1 345 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 PHF21AQ96BD5 680 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 C8orf44Q96CB5 159 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 SMIM19Q96E16 107 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 ZMYND19Q96E35 227 aaPredicted RBP4.37□□□□□ -1.71
SRP54-211ENST00000556445 RBP7Q96R05 134 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 TBX5Q99593 518 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 TTYH2Q9BSA4 534 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 TMED9Q9BVK6 235 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 HCAR1Q9BXC0 346 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 MROQ9BYG7 248 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 COMMD4Q9H0A8 199 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 OPN3Q9H1Y3 402 aaPredicted RBP4.37□□□□□ -1.71
SRP54-211ENST00000556445 CHST11Q9NPF2 352 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 CLEC5AQ9NY25 188 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 TAS2R5Q9NYW4 299 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 MED11Q9P086 117 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 DAPK2Q9UIK4 370 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 TINAGQ9UJW2 476 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 NPIPA1Q9UND3 350 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 POLDIP2Q9Y2S7 368 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 MEMO1Q9Y316 297 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 ZDBF2Q9HCK1 2354 aa4.37□□□□□ -1.71
SRP54-211ENST00000556445 LOC102725191A0A1B0GVB3 256 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 A0A1W2PNV4 684 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 TMEM212A6NML5 194 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 FTCDNL1E5RQL4 147 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 C11orf98E9PRG8 122 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 H0YL77 283 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 CDX4O14627 284 aaPredicted RBP4.36□□□□□ -1.71
SRP54-211ENST00000556445 TNFRSF13BO14836 293 aaPredicted RBP4.36□□□□□ -1.71
SRP54-211ENST00000556445 PFDN1O60925 122 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 KHDRBS3O75525 346 aaKnown RBP4.36□□□□□ -1.71
SRP54-211ENST00000556445 SC5DO75845 299 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 WISP2O76076 250 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 PTTG1O95997 202 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 P04436 131 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 SERPINA7P05543 415 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 GYPBP06028 91 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 MRPL3P09001 348 aaKnown RBP4.36□□□□□ -1.71
SRP54-211ENST00000556445 ARSBP15848 533 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 ZNF17P17021 662 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 TCN2P20062 427 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 TGFBR1P36897 503 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 TALDO1P37837 337 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 MNDAP41218 407 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 PTGDSP41222 190 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 UQCRFS1P47985 274 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 GDI2P50395 445 aaKnown RBP4.36□□□□□ -1.71
SRP54-211ENST00000556445 ATP1B3P54709 279 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 ATP5J2P56134 94 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 TMPRSS3P57727 454 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 OR12D2P58182 307 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 SLC35A1P78382 337 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 FOXF1Q12946 379 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 CDK5R1Q15078 307 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 EFNB3Q15768 340 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 VAMP3Q15836 100 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 ZNF239Q16600 458 aaKnown RBP4.36□□□□□ -1.71
SRP54-211ENST00000556445 PLPPR5Q32ZL2 321 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 ACSM3Q53FZ2 586 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 YIF1BQ5BJH7 314 aa4.36□□□□□ -1.71
SRP54-211ENST00000556445 MESTQ5EB52 335 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms