RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 PITPNAQ00169 270 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 IL13RA2Q14627 380 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 ZNF846Q147U1 533 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 MPV17LQ2QL34 196 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 SMIM21Q3B7S5 101 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 TMEM69Q5SWH9 247 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 FAM90A1Q86YD7 464 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 C11orf53Q8IXP5 236 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 FAM58AQ8N1B3 248 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 LRRC29Q8WV35 223 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 Q96M66 194 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 CACNG6Q9BXT2 260 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 LPAR5Q9H1C0 372 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 GCM1Q9NP62 436 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 AKIP1Q9NQ31 210 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 RBFOX1Q9NWB1 397 aaKnown RBP12.14□□□□□ -0.47
SHOX2-206ENST00000554685 RNF7Q9UBF6 113 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 GLS2Q9UI32 602 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 LAMP3Q9UQV4 416 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 ST3GAL6Q9Y274 331 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 NPTNQ9Y639 398 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 FLNCQ14315 2725 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 PLCE1Q9P212 2302 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 IGHV3-64DA0A0J9YX35 117 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 XRCC3O43542 346 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 PRKACAP17612 351 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 GLRA1P23415 457 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 MNDAP41218 407 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 NPBWR2P48146 333 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 MRPS11P82912 194 aaKnown RBP12.13□□□□□ -0.47
SHOX2-206ENST00000554685 SPIN3Q5JUX0 258 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 PYHIN1Q6K0P9 492 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 FAM131AQ6UXB0 335 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 ZNF826PQ6ZT77 177 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 FAM89BQ8N5H3 189 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 OR4M1Q8NGD0 313 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 PSMG3-AS1Q96PY0 264 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 PLEKHF2Q9H8W4 249 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 SPACA1Q9HBV2 294 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 HES4Q9HCC6 221 aa12.13□□□□□ -0.47
SHOX2-206ENST00000554685 IGHV1-69-2A0A0G2JMI3 117 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 A0A1W2PP11 408 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 SRRM5B3KS81 715 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 CDK2P24941 298 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 VEGFCP49767 419 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 MRPS10P82664 201 aaKnown RBP12.12□□□□□ -0.47
SHOX2-206ENST00000554685 PLA2G7Q13093 441 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 IL18Q14116 193 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 ZCCHC24Q8N2G6 241 aaKnown RBP12.12□□□□□ -0.47
SHOX2-206ENST00000554685 OR10R2Q8NGX6 335 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 ZNF488Q96MN9 340 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 GAL3ST1Q99999 423 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 CXorf56Q9H5V9 222 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 DLL4Q9NR61 685 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 PLEKHA6Q9Y2H5 1048 aa12.12□□□□□ -0.47
SHOX2-206ENST00000554685 RAB27BO00194 218 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 KNG1P01042 644 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 GABRR1P24046 479 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 CD40LGP29965 261 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 HFEQ30201 348 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 ACP7Q6ZNF0 438 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 MFSD4AQ8N468 514 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 CHST4Q8NCG5 386 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 RAB3CQ96E17 227 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 NEDD4LQ96PU5 975 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 CCL19Q99731 98 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 SOSTQ9BQB4 213 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
SHOX2-206ENST00000554685 TMEM106BQ9NUM4 274 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 DNAJB11Q9UBS4 358 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 EDARQ9UNE0 448 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 V9GYH0 126 aa12.11□□□□□ -0.47
SHOX2-206ENST00000554685 TRAV18A0A075B6X5 111 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 SH2D1BO14796 132 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 OR7C1O76099 320 aaPredicted RBP12.1□□□□□ -0.47
SHOX2-206ENST00000554685 LHBP01229 141 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 GSTP1P09211 210 aaKnown RBP12.1□□□□□ -0.47
SHOX2-206ENST00000554685 INHBBP09529 407 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 MUC1P15941 1255 aaPredicted RBP12.1□□□□□ -0.47
SHOX2-206ENST00000554685 BLVRBP30043 206 aaPredicted RBP12.1□□□□□ -0.47
SHOX2-206ENST00000554685 PMELP40967 661 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 TAS2R20P59543 309 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 IKZF1Q13422 519 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 ZNF146Q15072 292 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 TAF9Q16594 264 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 PIGYQ3MUY2 71 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 SPRNQ5BIV9 151 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 Q6ZTK2 550 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 ZNF295-AS1Q8N0V1 137 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 GCSAMQ8N6F7 178 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 GDPD1Q8N9F7 314 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 RDH5Q92781 318 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 NICN1Q9BSH3 213 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 IFT22Q9H7X7 185 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 HSF4Q9ULV5 492 aa12.1□□□□□ -0.47
SHOX2-206ENST00000554685 MRPS7Q9Y2R9 242 aaKnown RBP12.1□□□□□ -0.47
SHOX2-206ENST00000554685 F8VVB4 439 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 F8VWA3 439 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 TMEM178BH3BS89 294 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 OVOL3O00110 214 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms