RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 OR2G2Q8NGZ5 317 aa17.15■□□□□ 0.34
SCARB1-210ENST00000545493 PPP1R35Q8TAP8 253 aa17.15■□□□□ 0.34
SCARB1-210ENST00000545493 RNFT2Q96EX2 444 aa17.15■□□□□ 0.34
SCARB1-210ENST00000545493 BORCS8Q96FH0 119 aa17.15■□□□□ 0.34
SCARB1-210ENST00000545493 HRASLS5Q96KN8 279 aa17.15■□□□□ 0.34
SCARB1-210ENST00000545493 MMP27Q9H306 513 aa17.15■□□□□ 0.34
SCARB1-210ENST00000545493 IMPAD1Q9NX62 359 aa17.15■□□□□ 0.34
SCARB1-210ENST00000545493 IGKV1-9A0A0C4DH69 117 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 TMEM82A0PJX8 343 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 C17orf98A8MV24 154 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 INMTO95050 263 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 NANOS3P60323 173 aaKnown RBP17.14■□□□□ 0.33
SCARB1-210ENST00000545493 ACTC1P68032 377 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 ACTA1P68133 377 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 CNN3Q15417 329 aaKnown RBP17.14■□□□□ 0.33
SCARB1-210ENST00000545493 SLC35E4Q6ICL7 350 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 LHFPL4Q7Z7J7 247 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 TRUB1Q8WWH5 349 aaKnown RBP17.14■□□□□ 0.33
SCARB1-210ENST00000545493 PP6455Q8WZ26 134 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 C10orf35Q96D05 121 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 ADI1Q9BV57 179 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 HEXA-AS1Q9H8Q6 139 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 TCF7L1Q9HCS4 588 aa17.14■□□□□ 0.33
SCARB1-210ENST00000545493 ODF3BA8MYP8 253 aa17.13■□□□□ 0.33
SCARB1-210ENST00000545493 TSPAN15O95858 294 aa17.13■□□□□ 0.33
SCARB1-210ENST00000545493 ALDH3A2P51648 485 aa17.13■□□□□ 0.33
SCARB1-210ENST00000545493 SNRPGP62308 76 aaKnown RBP17.13■□□□□ 0.33
SCARB1-210ENST00000545493 DEFA6Q01524 100 aa17.13■□□□□ 0.33
SCARB1-210ENST00000545493 AANATQ16613 207 aa17.13■□□□□ 0.33
SCARB1-210ENST00000545493 ZIK1Q3SY52 487 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-210ENST00000545493 SLC25A30Q5SVS4 291 aa17.13■□□□□ 0.33
SCARB1-210ENST00000545493 DYNAPQ8N1N2 210 aa17.13■□□□□ 0.33
SCARB1-210ENST00000545493 EMG1Q92979 244 aaKnown RBP17.13■□□□□ 0.33
SCARB1-210ENST00000545493 MBOAT4Q96T53 435 aa17.13■□□□□ 0.33
SCARB1-210ENST00000545493 RBFOX1Q9NWB1 397 aaKnown RBP17.13■□□□□ 0.33
SCARB1-210ENST00000545493 FRRS1LQ9P0K9 344 aa17.13■□□□□ 0.33
SCARB1-210ENST00000545493 AASSQ9UDR5 926 aa17.13■□□□□ 0.33
SCARB1-210ENST00000545493 DNAH3Q8TD57 4116 aa17.13■□□□□ 0.33
SCARB1-210ENST00000545493 NOTCH1P46531 2555 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 SLC16A6O15403 523 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 CHST1O43916 411 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 CHRM2P08172 466 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 NPBWR2P48146 333 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 POU3F4P49335 361 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 EDDM3BP56851 147 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 OR12D2P58182 307 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 ZNF91Q05481 1191 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 LDLRAD2Q5SZI1 272 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 OR8H2Q8N162 312 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 OR10AC1Q8NH08 325 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 PIFOQ8TCI5 191 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 FBLN5Q9UBX5 448 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 SIGLEC9Q9Y336 463 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 ORC6Q9Y5N6 252 aa17.12■□□□□ 0.33
SCARB1-210ENST00000545493 hCG_1809904A0A1W2PP81 198 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 A0A1W2PPE2 198 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 A0A1W2PR64 198 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 A0A1W2PRV1 198 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 FAM90A8PA6NJQ4 464 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 HAND1O96004 215 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 SERPINA3P01011 423 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 IGHA1P01876 353 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 RBP4P02753 201 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 GABRB1P18505 474 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 BCL3P20749 454 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 AZGP1P25311 298 aaKnown RBP17.11■□□□□ 0.33
SCARB1-210ENST00000545493 GABRA5P31644 462 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 RBP2P50120 134 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 TMEM244Q5VVB8 128 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 FDX2Q6P4F2 183 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 UTS2BQ765I0 119 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 DNAAF1Q8NEP3 725 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 OR51A4Q8NGJ6 313 aa17.11■□□□□ 0.33
SCARB1-210ENST00000545493 TET2Q6N021 2002 aaPredicted RBP17.1■□□□□ 0.33
SCARB1-210ENST00000545493 TRBV2A0A0J9YWF9 115 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 DAPL1A0PJW8 107 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 ISG15P05161 165 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 ZNF728P0DKX0 622 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 ATF1P18846 271 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 EFNB2P52799 333 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 EDDM3AQ14507 147 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 MEDAGQ5VYS4 303 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 ZNF626Q68DY1 528 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 GDPD3Q7L5L3 318 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 RNF144BQ7Z419 303 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 EGFL6Q8IUX8 553 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 Q8IYB0 196 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 CBR4Q8N4T8 237 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 TPRX1Q8N7U7 411 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 OR52N4Q8NGI2 321 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 LGALS12Q96DT0 336 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 SNX22Q96L94 193 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 CHST6Q9GZX3 395 aa17.1■□□□□ 0.33
SCARB1-210ENST00000545493 EXOGQ9Y2C4 368 aaKnown RBP17.1■□□□□ 0.33
SCARB1-210ENST00000545493 PSPNO60542 156 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 HTR1AP08908 422 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 IGHV1-8P0DP01 117 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 ZNF20P17024 532 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 ATP1B3P54709 279 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 PDLIM3Q53GG5 364 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms