RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 LOXL1Q08397 574 aaPredicted RBP14.32□□□□□ -0.12
LIG1-204ENST00000542460 GPR176Q14439 515 aa14.32□□□□□ -0.12
LIG1-204ENST00000542460 ELP2Q6IA86 826 aa14.32□□□□□ -0.12
LIG1-204ENST00000542460 SPNS3Q6ZMD2 512 aa14.32□□□□□ -0.12
LIG1-204ENST00000542460 DCDC5Q6ZRR9 648 aa14.32□□□□□ -0.12
LIG1-204ENST00000542460 CLVS1Q8IUQ0 354 aaPredicted RBP14.32□□□□□ -0.12
LIG1-204ENST00000542460 Q8NFD4 153 aa14.32□□□□□ -0.12
LIG1-204ENST00000542460 CLDND2Q8NHS1 167 aa14.32□□□□□ -0.12
LIG1-204ENST00000542460 HMG20AQ9NP66 347 aa14.32□□□□□ -0.12
LIG1-204ENST00000542460 BATF3Q9NR55 127 aa14.32□□□□□ -0.12
LIG1-204ENST00000542460 PCDHB10Q9UN67 800 aa14.32□□□□□ -0.12
LIG1-204ENST00000542460 F8P00451 2351 aa14.32□□□□□ -0.12
LIG1-204ENST00000542460 A0A096LNT2 108 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 TNFRSF13BO14836 293 aaPredicted RBP14.31□□□□□ -0.12
LIG1-204ENST00000542460 KNG1P01042 644 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 GYPAP02724 150 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 CSTBP04080 98 aaKnown RBP14.31□□□□□ -0.12
LIG1-204ENST00000542460 UBBP0CG47 229 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 TGFBR1P36897 503 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 OR10A3P58181 314 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 VBP1P61758 197 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 NCS1P62166 190 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 MXD1Q05195 221 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 CTF1Q16619 201 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 ATPAF1Q5TC12 328 aaPredicted RBP14.31□□□□□ -0.12
LIG1-204ENST00000542460 STUMQ69YW2 141 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 FAM166AQ6J272 317 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 FIP1L1Q6UN15 594 aaKnown RBP14.31□□□□□ -0.12
LIG1-204ENST00000542460 OR5T2Q8NGG2 359 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 OR10K1Q8NGX5 313 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 ANGPTL6Q8NI99 470 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 DNTTIP1Q9H147 329 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 MIOXQ9UGB7 285 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 IFITM5A6NNB3 132 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 CEACAM18A8MTB9 384 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 NOTOA8MTQ0 251 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 HTR3BO95264 441 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 HEXAP06865 529 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 PSG2P11465 335 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 PRKACAP17612 351 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 CPT2P23786 658 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 CFPP27918 469 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 TMBIM6P55061 237 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 FGF12P61328 243 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 BLMHQ13867 455 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 RAB11BQ15907 218 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 DGUOKQ16854 277 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 SLC22A6Q4U2R8 563 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 SPIN3Q5JUX0 258 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 NR2C2APQ86WQ0 139 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 SLC25A28Q96A46 364 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 C1orf147Q96MC9 270 aaPredicted RBP14.31□□□□□ -0.12
LIG1-204ENST00000542460 PATZ1Q9HBE1 687 aaKnown RBP14.31□□□□□ -0.12
LIG1-204ENST00000542460 STEAP1Q9UHE8 339 aa14.31□□□□□ -0.12
LIG1-204ENST00000542460 HIVEP1P15822 2718 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 IGKV1D-17A0A075B6S4 117 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 RFPL4AA6NLU0 287 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 RFPL4AL1F8VTS6 287 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 AIPO00170 330 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 CLEC2LP0C7M8 214 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 CALCBP10092 127 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 ARSBP15848 533 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 SERPINA2P20848 420 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 LMO4P61968 165 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 ZNF146Q15072 292 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 OR51T1Q8NGJ9 327 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 RAB2BQ8WUD1 216 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 RAB39BQ96DA2 213 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 BCL7BQ9BQE9 202 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 KAAG1Q9UBP8 84 aa14.3□□□□□ -0.12
LIG1-204ENST00000542460 A0A0G2JK05 382 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 SMIM30A4D0T7 59 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 TMPRSS2O15393 492 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 ADAM20O43506 726 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 BPNT1O95861 308 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 IL1AP01583 271 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 IGHV2-5P01817 119 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 WNT2P09544 360 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 GTF2F2P13984 249 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 RPS2P15880 293 aaKnown RBP14.29□□□□□ -0.12
LIG1-204ENST00000542460 PRDX2P32119 198 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 RPS19P39019 145 aaKnown RBP14.29□□□□□ -0.12
LIG1-204ENST00000542460 GABRA2P47869 451 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 HES5Q5TA89 166 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 LYPD2Q6UXB3 125 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 NLRC3Q7RTR2 1065 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 SLC36A1Q7Z2H8 476 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 OSR2Q8N2R0 312 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 MRPS24Q96EL2 167 aaKnown RBP14.29□□□□□ -0.12
LIG1-204ENST00000542460 CCL13Q99616 98 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 CST11Q9H112 138 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 ZNF665Q9H7R5 613 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 SEBOXQ9HB31 216 aaPredicted RBP14.29□□□□□ -0.12
LIG1-204ENST00000542460 IL36RNQ9UBH0 155 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 OR14J1Q9UGF5 321 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 GLS2Q9UI32 602 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 ZNF222Q9UK12 451 aa14.29□□□□□ -0.12
LIG1-204ENST00000542460 NKX6-3A6NJ46 265 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 H7C1Q1 480 aa14.28□□□□□ -0.12
LIG1-204ENST00000542460 NOL3O60936 208 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms