RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 CPNE2Q96FN4 548 aaPredicted RBP7.85□□□□□ -1.15
DDX55-208ENST00000541259 CEP19Q96LK0 163 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 S100A13Q99584 98 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 NRIP2Q9BQI9 281 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 METTL9Q9H1A3 318 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 BANF2Q9H503 90 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 CXorf56Q9H5V9 222 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 RBFOX1Q9NWB1 397 aaKnown RBP7.85□□□□□ -1.15
DDX55-208ENST00000541259 RNF7Q9UBF6 113 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 PDZD2O15018 2839 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 KIAA2026Q5HYC2 2103 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 DSCAML1Q8TD84 2053 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 YLPM1P49750 1951 aaKnown RBP7.84□□□□□ -1.15
DDX55-208ENST00000541259 ARHGAP32A7KAX9 2087 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 IGHV3OR15-7A0A075B7D8 119 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 TMEM14DPA8MWL7 114 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 SRRM5B3KS81 715 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 TMEM178BH3BS89 294 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.84□□□□□ -1.15
DDX55-208ENST00000541259 CTDSP2O14595 271 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 NOS1APO75052 506 aaPredicted RBP7.84□□□□□ -1.15
DDX55-208ENST00000541259 RP2O75695 350 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 CRTAPO75718 401 aaPredicted RBP7.84□□□□□ -1.15
DDX55-208ENST00000541259 BPNT1O95861 308 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 MPIG6BO95866 241 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 CYB5AP00167 134 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 ACAA1P09110 424 aaPredicted RBP7.84□□□□□ -1.15
DDX55-208ENST00000541259 ZNF16P17020 682 aaPredicted RBP7.84□□□□□ -1.15
DDX55-208ENST00000541259 GLRA1P23415 457 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 SOX6P35712 828 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 CFHR2P36980 270 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 PTH2RP49190 550 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 TAGLNQ01995 201 aaKnown RBP7.84□□□□□ -1.15
DDX55-208ENST00000541259 PDCD1Q15116 288 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 DGUOKQ16854 277 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 SFRP4Q6FHJ7 346 aaPredicted RBP7.84□□□□□ -1.15
DDX55-208ENST00000541259 ACP7Q6ZNF0 438 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 C8orf86Q6ZUL3 223 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 OR11L1Q8NGX0 322 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 RDH5Q92781 318 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 ERGIC1Q969X5 290 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 PERPQ96FX8 193 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 CYYR1Q96J86 154 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 GAL3ST1Q99999 423 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 NXF2Q9GZY0 626 aaKnown RBP7.84□□□□□ -1.15
DDX55-208ENST00000541259 HES4Q9HCC6 221 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 TMEM106BQ9NUM4 274 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 ZNF701Q9NV72 531 aaPredicted RBP7.84□□□□□ -1.15
DDX55-208ENST00000541259 IL36GQ9NZH8 169 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 ZNF581Q9P0T4 197 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 ABRACLQ9P1F3 81 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 COMMD3Q9UBI1 195 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 POLDIP2Q9Y2S7 368 aa7.84□□□□□ -1.15
DDX55-208ENST00000541259 MED13LQ71F56 2210 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 CSMD1Q96PZ7 3565 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 MAP1AP78559 2803 aaPredicted RBP7.83□□□□□ -1.16
DDX55-208ENST00000541259 NAV2Q8IVL1 2488 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 A0A0A6YYD4 124 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 SSX4O60224 188 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 HPGDSO60760 199 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 NXPH2O95156 264 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 CSTBP04080 98 aaKnown RBP7.83□□□□□ -1.16
DDX55-208ENST00000541259 UBBP0CG47 229 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 IRF2P14316 349 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 MGMTP16455 207 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 PRKACAP17612 351 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 DUSP1P28562 367 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 CEBPDP49716 269 aaPredicted RBP7.83□□□□□ -1.16
DDX55-208ENST00000541259 ATP5J2P56134 94 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 CARTPTQ16568 116 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 ZNF181Q2M3W8 571 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 HFEQ30201 348 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 PIGYQ3MUY2 71 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 ZNF404Q494X3 552 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 ELP2Q6IA86 826 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 RTN4RL2Q86UN3 420 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 FAM58AQ8N1B3 248 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 ZNF525Q8N782 197 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 SAMD12Q8N8I0 201 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 DTX3Q8N9I9 347 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 DEFB108BQ8NET1 73 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 Q8NFD4 153 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 OR5T2Q8NGG2 359 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 MCFD2Q8NI22 146 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 EMG1Q92979 244 aaKnown RBP7.83□□□□□ -1.16
DDX55-208ENST00000541259 SLC25A38Q96DW6 304 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 LURAP1Q96LR2 239 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 NICN1Q9BSH3 213 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 SELENOIQ9C0D9 397 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 MIXL1Q9H2W2 232 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 HMG20AQ9NP66 347 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 GHRLQ9UBU3 117 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 SPATA2Q9UM82 520 aa7.83□□□□□ -1.16
DDX55-208ENST00000541259 PRRC2AP48634 2157 aaKnown RBP7.83□□□□□ -1.16
DDX55-208ENST00000541259 A0A075B6Q4 140 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 LRRC30A6NM36 301 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 EIF4EP06730 217 aaKnown RBP7.82□□□□□ -1.16
DDX55-208ENST00000541259 PAX1P15863 534 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 DNASE1P24855 282 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 BMXP51813 675 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms