RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 KDM4BO94953 1096 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 CDRT1O95170 752 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 HCKP08631 526 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 UCHL1P09936 223 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 MUC1P15941 1255 aaPredicted RBP10.85□□□□□ -0.67
CHFR-216ENST00000538235 RAB3AP20336 220 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 PRKACBP22694 351 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 DUSP1P28562 367 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 PITPNBP48739 271 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 ATP1B3P54709 279 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 SNU13P55769 128 aaKnown RBP10.85□□□□□ -0.67
CHFR-216ENST00000538235 NEDD8Q15843 81 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 DDI2Q5TDH0 399 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 ZNRF1Q8ND25 227 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 OR4D6Q8NGJ1 314 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 RAB39BQ96DA2 213 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 CEP19Q96LK0 163 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 HIF1ANQ9NWT6 349 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 KAAG1Q9UBP8 84 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 OPN4Q9UHM6 478 aa10.85□□□□□ -0.67
CHFR-216ENST00000538235 POLR3KQ9Y2Y1 108 aaPredicted RBP10.85□□□□□ -0.67
CHFR-216ENST00000538235 NIPBLQ6KC79 2804 aaeCLIP10.85□□□□□ -0.67
CHFR-216ENST00000538235 TRAV38-1A0A0B4J264 116 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 TMEM82A0PJX8 343 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 RFPL4AA6NLU0 287 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 B4DSR2 109 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 RFPL4AL1F8VTS6 287 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 ZNF737O75373 536 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 SERPINA3P01011 423 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 MAS1P04201 325 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 ACAA1P09110 424 aaPredicted RBP10.84□□□□□ -0.67
CHFR-216ENST00000538235 PSMB9P28065 219 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 BDKRB2P30411 391 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 DVL1P1P54792 670 aaPredicted RBP10.84□□□□□ -0.67
CHFR-216ENST00000538235 DLX1P56177 255 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 IKZF1Q13422 519 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 GPR50Q13585 617 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 ATPAF1Q5TC12 328 aaPredicted RBP10.84□□□□□ -0.67
CHFR-216ENST00000538235 CD200R1LQ6Q8B3 271 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 TCF23Q7RTU1 214 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 CEACAM19Q7Z692 300 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 RTN4RL2Q86UN3 420 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 NR2C2APQ86WQ0 139 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 OR5D14Q8NGL3 314 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 TMEM186Q96B77 213 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 TMIGD2Q96BF3 282 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 SSBP3Q9BWW4 388 aaPredicted RBP10.84□□□□□ -0.67
CHFR-216ENST00000538235 RNF167Q9H6Y7 350 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 MIOXQ9UGB7 285 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 KIAA2026Q5HYC2 2103 aa10.84□□□□□ -0.67
CHFR-216ENST00000538235 SIGLEC5O15389 551 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 TMPRSS2O15393 492 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 RGS9O75916 674 aaPredicted RBP10.83□□□□□ -0.68
CHFR-216ENST00000538235 NXPH2O95156 264 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 ALDOBP05062 364 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 CD2P06729 351 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 HOXB4P17483 251 aaPredicted RBP10.83□□□□□ -0.68
CHFR-216ENST00000538235 GABRA5P31644 462 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 TGFBR1P36897 503 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 PDCD1Q15116 288 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 MICBQ29980 383 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 CR1LQ2VPA4 569 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 SYT6Q5T7P8 510 aaPredicted RBP10.83□□□□□ -0.68
CHFR-216ENST00000538235 ASCL4Q6XD76 172 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 SVOPQ8N4V2 548 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 OR8B3Q8NGG8 313 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 OR51F2Q8NH61 342 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 ZNF671Q8TAW3 534 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 TNFAIP8L1Q8WVP5 186 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 EMG1Q92979 244 aaKnown RBP10.83□□□□□ -0.68
CHFR-216ENST00000538235 C12orf43Q96C57 262 aaKnown RBP10.83□□□□□ -0.68
CHFR-216ENST00000538235 SDSLQ96GA7 329 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 OR8B2Q96RD0 313 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 CNTD2Q9H8S5 307 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 HMG20AQ9NP66 347 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 TMEM138Q9NPI0 162 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 DNAJB11Q9UBS4 358 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 OR14J1Q9UGF5 321 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 PCDHB10Q9UN67 800 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 FOXJ3Q9UPW0 622 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 POLDIP2Q9Y2S7 368 aa10.83□□□□□ -0.68
CHFR-216ENST00000538235 IGHV2-70DA0A0C4DH43 119 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 SMIM31A0A1B0GVY4 71 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 MEX3AA1L020 520 aaKnown RBP10.82□□□□□ -0.68
CHFR-216ENST00000538235 DPPA5A6NC42 116 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 A8MV72 311 aaPredicted RBP10.82□□□□□ -0.68
CHFR-216ENST00000538235 PSPNO60542 156 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 FSHBP01225 129 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 CD37P11049 281 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 GABRA2P47869 451 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 GNB2P62879 340 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 PRB3Q04118 309 aaPredicted RBP10.82□□□□□ -0.68
CHFR-216ENST00000538235 SMIM21Q3B7S5 101 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 PIGYQ3MUY2 71 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 ESCO2Q56NI9 601 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 FAM166AQ6J272 317 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 Q6P435 159 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 C17orf107Q6ZR85 190 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 SATL1Q86VE3 508 aa10.82□□□□□ -0.68
CHFR-216ENST00000538235 MS4A15Q8N5U1 240 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms