RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 OR4C45A6NMZ5 311 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 C17orf98A8MV24 154 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 E9PI62 339 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 J3QLW9 94 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 KCNAB3O43448 404 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 GATBO75879 557 aaKnown RBP8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 CLPXO76031 633 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 IGKV1D-12P01611 117 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 ISG15P05161 165 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 UBCP0CG48 685 aaKnown RBP8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 PIPP12273 146 aaPredicted RBP8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 ZNF19P17023 458 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 ATF1P18846 271 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 COX7A1P24310 79 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 BMXP51813 675 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 MIDNQ504T8 468 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 LDLRAD2Q5SZI1 272 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 MEDAGQ5VYS4 303 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 TREML4Q6UXN2 200 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 GDPGP1Q6ZNW5 385 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 C17orf107Q6ZR85 190 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 TCF23Q7RTU1 214 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 FAM220AQ7Z4H9 259 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 LHFPL4Q7Z7J7 247 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 EGFL6Q8IUX8 553 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 ENTHD1Q8IYW4 607 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 DYNAPQ8N1N2 210 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 DNAAF1Q8NEP3 725 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 OR52N4Q8NGI2 321 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 OR51A4Q8NGJ6 313 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 RHOXF1Q8NHV9 184 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 PPP1R35Q8TAP8 253 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 PIFOQ8TCI5 191 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 PELI1Q96FA3 418 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 FAM234AQ9H0X4 552 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 MEGF9Q9H1U4 602 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 ISG20L2Q9H9L3 353 aaKnown RBP8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 PLEKHA1Q9HB21 404 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 AMBNQ9NP70 447 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 RBFOX1Q9NWB1 397 aaKnown RBP8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 MYRFQ9Y2G1 1151 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 DSCAML1Q8TD84 2053 aa8.48□□□□□ -1.05
PRPF40B-204ENST00000527253 H3BUX3 64 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 PSPNO60542 156 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 TSPAN9O75954 239 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 PAHP00439 452 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 IGHA1P01876 353 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 CHRM2P08172 466 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 HTR1AP08908 422 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 DBTP11182 482 aaKnown RBP8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 BCL3P20749 454 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 AZGP1P25311 298 aaKnown RBP8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 DUSP1P28562 367 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 CCR9P51686 369 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 ACTC1P68032 377 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 ACTA1P68133 377 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 ZNF91Q05481 1191 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 LY6EQ16553 131 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 TMEM244Q5VVB8 128 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 DHRS7BQ6IAN0 325 aaPredicted RBP8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 ASPHD2Q6ICH7 369 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 ZNF782Q6ZMW2 699 aaPredicted RBP8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 UTS2BQ765I0 119 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 KCTD20Q7Z5Y7 419 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 LHFPL3Q86UP9 236 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 ACBD7Q8N6N7 88 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 ASCC1Q8N9N2 400 aaKnown RBP8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 OR4S1Q8NGB4 309 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 APH1BQ8WW43 257 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 PP6455Q8WZ26 134 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 C10orf35Q96D05 121 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 BORCS8Q96FH0 119 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 C4orf36Q96KX1 117 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 SSX3Q99909 188 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 PPA2Q9H2U2 334 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 SIGLEC9Q9Y336 463 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 ORC6Q9Y5N6 252 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 GMPPBQ9Y5P6 360 aa8.47□□□□□ -1.05
PRPF40B-204ENST00000527253 FAM90A8PA6NJQ4 464 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 HAND1O96004 215 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 SERPINA3P01011 423 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 POU3F4P49335 361 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 RBP2P50120 134 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 ATP1B3P54709 279 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 MTCP1P56278 107 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 PDZK1IP1Q13113 114 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 ALKBH1Q13686 389 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 GALEQ14376 348 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 CNN3Q15417 329 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 HIST2H2BDQ6DRA6 164 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 SLC35E4Q6ICL7 350 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 BRICD5Q6PL45 260 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 ZBTB49Q6ZSB9 765 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 FAM58AQ8N1B3 248 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 TPRX1Q8N7U7 411 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 OR5R1Q8NH85 324 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 EMG1Q92979 244 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 RFT1Q96AA3 541 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 SNX22Q96L94 193 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 SPACA5Q96QH8 159 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms