RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 ZMAT3Q9HA38 289 aaKnown RBP8.43□□□□□ -1.06
VPS28-204ENST00000526054 ACOT13Q9NPJ3 140 aa8.43□□□□□ -1.06
VPS28-204ENST00000526054 BATF3Q9NR55 127 aa8.43□□□□□ -1.06
VPS28-204ENST00000526054 MMP26Q9NRE1 261 aa8.43□□□□□ -1.06
VPS28-204ENST00000526054 RASL12Q9NYN1 266 aa8.43□□□□□ -1.06
VPS28-204ENST00000526054 TAS2R4Q9NYW5 299 aa8.43□□□□□ -1.06
VPS28-204ENST00000526054 OR5V1Q9UGF6 321 aa8.43□□□□□ -1.06
VPS28-204ENST00000526054 NUP50Q9UKX7 468 aa8.43□□□□□ -1.06
VPS28-204ENST00000526054 MGAM2Q2M2H8 2515 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 IGKV1-27A0A075B6S5 117 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 A8MXK9 166 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 ZNF879B4DU55 563 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.42□□□□□ -1.06
VPS28-204ENST00000526054 ADAM20O43506 726 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 NOS1APO75052 506 aaPredicted RBP8.42□□□□□ -1.06
VPS28-204ENST00000526054 NXPH2O95156 264 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 GYPAP02724 150 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 WNT2P09544 360 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 HKR1P10072 659 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 JUNBP17275 347 aaPredicted RBP8.42□□□□□ -1.06
VPS28-204ENST00000526054 FSTP19883 344 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 PRTN3P24158 256 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 PSMA1P25786 263 aaKnown RBP8.42□□□□□ -1.06
VPS28-204ENST00000526054 PITPNBP48739 271 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 HOXA4Q00056 320 aaPredicted RBP8.42□□□□□ -1.06
VPS28-204ENST00000526054 EMX1Q04741 257 aaPredicted RBP8.42□□□□□ -1.06
VPS28-204ENST00000526054 TPBGQ13641 420 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 TRAM1Q15629 374 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 LIPKQ5VXJ0 399 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 ZNF529Q6P280 563 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 SHISA2Q6UWI4 295 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 SLC25A26Q70HW3 274 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 SLC36A1Q7Z2H8 476 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 MKXQ8IYA7 352 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 Q8IYB0 196 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 CEP19Q96LK0 163 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 DERL3Q96Q80 235 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 NRIP2Q9BQI9 281 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 ZNF747Q9BV97 191 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 TMED9Q9BVK6 235 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 SSBP3Q9BWW4 388 aaPredicted RBP8.42□□□□□ -1.06
VPS28-204ENST00000526054 DNTTIP1Q9H147 329 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 WDR13Q9H1Z4 485 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 NLKQ9UBE8 527 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 CLN8Q9UBY8 286 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 ZNF69Q9UC07 566 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 POLR3KQ9Y2Y1 108 aaPredicted RBP8.42□□□□□ -1.06
VPS28-204ENST00000526054 INSIG2Q9Y5U4 225 aa8.42□□□□□ -1.06
VPS28-204ENST00000526054 PKD1L1Q8TDX9 2849 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 TRBV5-7A0A0A0MS05 114 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 TRAPPC2LH3BP13 241 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 TMPRSS2O15393 492 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 GPX5O75715 221 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 ALDOBP05062 364 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 TFAP2AP05549 437 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 ACAA1P09110 424 aaPredicted RBP8.41□□□□□ -1.06
VPS28-204ENST00000526054 CPEP16870 476 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 BDKRB2P30411 391 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 ALDH3B2P48448 385 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 NPY4RP50391 375 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 GNB2P62879 340 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 BAMBIQ13145 260 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 KLF17Q5JT82 389 aaPredicted RBP8.41□□□□□ -1.06
VPS28-204ENST00000526054 PRR31Q5SQ13 230 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 DDI2Q5TDH0 399 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 UBE2UQ5VVX9 321 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 STUMQ69YW2 141 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 FIP1L1Q6UN15 594 aaKnown RBP8.41□□□□□ -1.06
VPS28-204ENST00000526054 LYPD2Q6UXB3 125 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 ACP7Q6ZNF0 438 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 PNLDC1Q8NA58 520 aaKnown RBP8.41□□□□□ -1.06
VPS28-204ENST00000526054 OR51A2Q8NGJ7 313 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 SLAMF9Q96A28 289 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 RFT1Q96AA3 541 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 ZNF488Q96MN9 340 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 SPACA5Q96QH8 159 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 GPER1Q99527 375 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 TMEM138Q9NPI0 162 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 SNTG1Q9NSN8 517 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 KAAG1Q9UBP8 84 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 FOXJ3Q9UPW0 622 aa8.41□□□□□ -1.06
VPS28-204ENST00000526054 OR2AT4A6NND4 320 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 IGFBP3P17936 291 aaPredicted RBP8.4□□□□□ -1.06
VPS28-204ENST00000526054 PSMB9P28065 219 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 GABRA5P31644 462 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 TGFBR2P37173 567 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 GABRA2P47869 451 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 PDZK1IP1Q13113 114 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 KISS1Q15726 138 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 TUSC1Q2TAM9 212 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 ACSM3Q53FZ2 586 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 LRRC10Q5BKY1 277 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 ATPAF1Q5TC12 328 aaPredicted RBP8.4□□□□□ -1.06
VPS28-204ENST00000526054 WDR25Q64LD2 544 aaPredicted RBP8.4□□□□□ -1.06
VPS28-204ENST00000526054 ASPHD2Q6ICH7 369 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 BTNL3Q6UXE8 466 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 GPR141Q7Z602 305 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 SATL1Q86VE3 508 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 SAXO1Q8IYX7 474 aa8.4□□□□□ -1.06
VPS28-204ENST00000526054 BCL6BQ8N143 479 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms