RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 M0R1W7 72 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 XPNPEP2O43895 674 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 SELENOFO60613 162 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 MRPS14O60783 128 aaKnown RBP5.32□□□□□ -1.56
CD44-221ENST00000526000 ENTPD6O75354 484 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 ZNF254O75437 659 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 RPSAP08865 295 aaKnown RBP5.32□□□□□ -1.56
CD44-221ENST00000526000 OR2T7P0C7T2 308 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 DCKP27707 260 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 DCTDP32321 178 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 ATP6V1E1P36543 226 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 GRB2P62993 217 aaKnown RBP5.32□□□□□ -1.56
CD44-221ENST00000526000 MRPL28Q13084 256 aaKnown RBP5.32□□□□□ -1.56
CD44-221ENST00000526000 DYNC1I2Q13409 638 aaKnown RBP5.32□□□□□ -1.56
CD44-221ENST00000526000 SSX2Q16385 188 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 C11orf91Q3C1V1 193 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 NCR3LG1Q68D85 454 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 KCTD18Q6PI47 426 aaPredicted RBP5.32□□□□□ -1.56
CD44-221ENST00000526000 HAGHLQ6PII5 290 aaPredicted RBP5.32□□□□□ -1.56
CD44-221ENST00000526000 CRIP3Q6Q6R5 217 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 PRSS45Q7RTY3 260 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 REC114Q7Z4M0 266 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 KCTD20Q7Z5Y7 419 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 CD177Q8N6Q3 437 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 CSNK2A3Q8NEV1 391 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 OR5D13Q8NGL4 314 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 OTOSQ8NHW6 89 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 C8orf46Q8TAG6 207 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 JAM3Q9BX67 310 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 CDCA4Q9BXL8 241 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 TTTY10Q9BZA0 68 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 HEXA-AS1Q9H8Q6 139 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.32□□□□□ -1.56
CD44-221ENST00000526000 ABCB10Q9NRK6 738 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 SERTAD4Q9NUC0 356 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 SCN3BQ9NY72 215 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 OR14J1Q9UGF5 321 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 EXOGQ9Y2C4 368 aaKnown RBP5.32□□□□□ -1.56
CD44-221ENST00000526000 LRRC42Q9Y546 428 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 HILPDAQ9Y5L2 63 aa5.32□□□□□ -1.56
CD44-221ENST00000526000 NBEAL2Q6ZNJ1 2754 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 SH2D7A6NKC9 451 aaPredicted RBP5.31□□□□□ -1.56
CD44-221ENST00000526000 ZNF670-ZNF695F2Z2N8 137 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 H3BSH0 61 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 SYNGR1O43759 233 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 WBP4O75554 376 aaKnown RBP5.31□□□□□ -1.56
CD44-221ENST00000526000 SULT1C4O75897 302 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 ARG1P05089 322 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 LYNP07948 512 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 DBTP11182 482 aaKnown RBP5.31□□□□□ -1.56
CD44-221ENST00000526000 ALOX5APP20292 161 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 CD24P25063 80 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 HOXD3P31249 432 aaPredicted RBP5.31□□□□□ -1.56
CD44-221ENST00000526000 PRDX2P32119 198 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 OPRL1P41146 370 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 CAV3P56539 151 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 KRTAP10-11P60412 298 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 RPL31P62899 125 aaKnown RBP5.31□□□□□ -1.56
CD44-221ENST00000526000 ROM1Q03395 351 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 ZNF91Q05481 1191 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 ZNF273Q14593 569 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 RBM48Q5RL73 367 aaKnown RBP5.31□□□□□ -1.56
CD44-221ENST00000526000 C6orf141Q5SZD1 244 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 LDLRAD2Q5SZI1 272 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 RNLSQ5VYX0 342 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 PLEKHG7Q6ZR37 379 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 COMMD2Q86X83 199 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 NDUFA11Q86Y39 141 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 ZDHHC23Q8IYP9 409 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 C11orf42Q8N5U0 333 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 ACBD7Q8N6N7 88 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 BBS1Q8NFJ9 593 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 OR4F17Q8NGA8 305 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 OR5AU1Q8NGC0 362 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 OR8B12Q8NGG6 310 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 OR10Z1Q8NGY1 313 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 ZNF671Q8TAW3 534 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 RNF133Q8WVZ7 376 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 APH1BQ8WW43 257 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 HPSE2Q8WWQ2 592 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 C12orf43Q96C57 262 aaKnown RBP5.31□□□□□ -1.56
CD44-221ENST00000526000 RNFT2Q96EX2 444 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 OR4F4Q96R69 305 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 PRSS22Q9GZN4 317 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 TLNRD1Q9H1K6 362 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 OPA3Q9H6K4 179 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 ADGRL4Q9HBW9 690 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 RAB18Q9NP72 206 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 FGF20Q9NP95 211 aaPredicted RBP5.31□□□□□ -1.56
CD44-221ENST00000526000 CHCHD3Q9NX63 227 aaKnown RBP5.31□□□□□ -1.56
CD44-221ENST00000526000 LAMP5Q9UJQ1 280 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 KLHDC2Q9Y2U9 406 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 EXOSC1Q9Y3B2 195 aaKnown RBP5.31□□□□□ -1.56
CD44-221ENST00000526000 TPRKBQ9Y3C4 175 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 MPC1Q9Y5U8 109 aa5.31□□□□□ -1.56
CD44-221ENST00000526000 TCRBV4S1A1TA0A5B7 111 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 A6NDX4 124 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 TMEM210A6NLX4 147 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 J3QRE1 110 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 MAGEB4O15481 346 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms