RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 SGCDQ92629 289 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 C12orf43Q96C57 262 aaKnown RBP10.34□□□□□ -0.75
SMCO4-202ENST00000525141 WDFY2Q96P53 400 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 PCGF1Q9BSM1 259 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 ZNF747Q9BV97 191 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 ZCCHC4Q9H5U6 513 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 NEK6Q9HC98 313 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 DHDHQ9UQ10 334 aa10.34□□□□□ -0.75
SMCO4-202ENST00000525141 LSM2Q9Y333 95 aaKnown RBP10.34□□□□□ -0.75
SMCO4-202ENST00000525141 TRRAPQ9Y4A5 3859 aa10.33□□□□□ -0.75
SMCO4-202ENST00000525141 IGKV1-9A0A0C4DH69 117 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 FAM230AA0A1W2PPH8 454 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 J3QT63 122 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 ENSAO43768 121 aaKnown RBP10.33□□□□□ -0.76
SMCO4-202ENST00000525141 RHBDL1O75783 438 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 TOX4O94842 621 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 CELP19835 753 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 RBP2P50120 134 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 ATP1B3P54709 279 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 C16orf87Q6PH81 154 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 HAGHLQ6PII5 290 aaPredicted RBP10.33□□□□□ -0.76
SMCO4-202ENST00000525141 TSEN15Q8WW01 171 aaKnown RBP10.33□□□□□ -0.76
SMCO4-202ENST00000525141 SPSB1Q96BD6 273 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 BORCS8Q96FH0 119 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 PGLYRP3Q96LB9 341 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 PKIBQ9C010 78 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 CNTD2Q9H8S5 307 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 ISYNA1Q9NPH2 558 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 RASL12Q9NYN1 266 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 POLDIP2Q9Y2S7 368 aa10.33□□□□□ -0.76
SMCO4-202ENST00000525141 MGAM2Q2M2H8 2515 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 IGKV1-27A0A075B6S5 117 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 TRBV5-5A0A0J9YX44 114 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 TMPRSS2O15393 492 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 HOXA3O43365 443 aaPredicted RBP10.32□□□□□ -0.76
SMCO4-202ENST00000525141 AKR7A2O43488 359 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 OCM2P0CE71 109 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 SELLP14151 372 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 GLRA1P23415 457 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 EEF1B2P24534 225 aaKnown RBP10.32□□□□□ -0.76
SMCO4-202ENST00000525141 AZGP1P25311 298 aaKnown RBP10.32□□□□□ -0.76
SMCO4-202ENST00000525141 MTCP1P56278 107 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 GABARAPL2P60520 117 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 RPS11P62280 158 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMCO4-202ENST00000525141 FOXL1Q12952 345 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 IL24Q13007 206 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 MED22Q15528 200 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 Q499Y3 187 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 ZNF529Q6P280 563 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 LHFPL2Q6ZUX7 228 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 CALHM1Q8IU99 346 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 FAM216BQ8N7L0 139 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 ZFP41Q8N8Y5 198 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 POC1AQ8NBT0 407 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 TRMT10AQ8TBZ6 339 aaKnown RBP10.32□□□□□ -0.76
SMCO4-202ENST00000525141 TMEM106AQ96A25 262 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 OR5M11Q96RB7 305 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 CCDC90BQ9GZT6 254 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 DNTTIP1Q9H147 329 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 SNTG1Q9NSN8 517 aa10.32□□□□□ -0.76
SMCO4-202ENST00000525141 RPUSD1Q9UJJ7 312 aaKnown RBP10.32□□□□□ -0.76
SMCO4-202ENST00000525141 SULT1B1O43704 296 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 SYNGR1O43759 233 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 GPX5O75715 221 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 ECDO95905 644 aaPredicted RBP10.31□□□□□ -0.76
SMCO4-202ENST00000525141 OCMP0CE72 109 aaPredicted RBP10.31□□□□□ -0.76
SMCO4-202ENST00000525141 PGA5P0DJD9 388 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 SOX2P48431 317 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 DLX1P56177 255 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 BPIFB3P59826 476 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 GMFBP60983 142 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 ERVK11-1P61568 191 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 RELBQ01201 579 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 PRB3Q04118 309 aaPredicted RBP10.31□□□□□ -0.76
SMCO4-202ENST00000525141 DOC2BQ14184 412 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 C11orf91Q3C1V1 193 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 STUMQ69YW2 141 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 ZNF788Q6ZQV5 615 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 ANGPTL5Q86XS5 388 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 MKXQ8IYA7 352 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 MS4A15Q8N5U1 240 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 Q8N7P7 452 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 PNLDC1Q8NA58 520 aaKnown RBP10.31□□□□□ -0.76
SMCO4-202ENST00000525141 OR13C9Q8NGT0 318 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 ANGPTL6Q8NI99 470 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 NPRL2Q8WTW4 380 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 THRSPQ92748 146 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 LHX4Q969G2 390 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 TMIGD2Q96BF3 282 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 OPALINQ96PE5 141 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 DNAJB11Q9UBS4 358 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 LRRC42Q9Y546 428 aa10.31□□□□□ -0.76
SMCO4-202ENST00000525141 IGHV1-69DA0A0B4J2H0 117 aa10.3□□□□□ -0.76
SMCO4-202ENST00000525141 OR2AT4A6NND4 320 aa10.3□□□□□ -0.76
SMCO4-202ENST00000525141 IGHV1-69P01742 117 aa10.3□□□□□ -0.76
SMCO4-202ENST00000525141 ALDOBP05062 364 aa10.3□□□□□ -0.76
SMCO4-202ENST00000525141 MELTFP08582 738 aa10.3□□□□□ -0.76
SMCO4-202ENST00000525141 RAB3AP20336 220 aa10.3□□□□□ -0.76
SMCO4-202ENST00000525141 OMGP23515 440 aa10.3□□□□□ -0.76
SMCO4-202ENST00000525141 TPBGQ13641 420 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms