RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 EI24O14681 340 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 HTR1AP08908 422 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 MPZP25189 248 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 ACTC1P68032 377 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 ACTA1P68133 377 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 PRSS35Q8N3Z0 413 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 C11orf44Q8N8P7 122 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 CCDC54Q8NEL0 328 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 OR13D1Q8NGV5 346 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 OR2T6Q8NHC8 308 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 RFT1Q96AA3 541 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 CHST5Q9GZS9 411 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 CHST6Q9GZX3 395 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 C16orf95Q9H693 158 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 HES4Q9HCC6 221 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 RAB18Q9NP72 206 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 SIGLEC9Q9Y336 463 aa13.14□□□□□ -0.31
IGHV3-42-201ENST00000520410 J3QLW9 94 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 ENTPD6O75354 484 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 TSPAN15O95858 294 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 HAND1O96004 215 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 ZNF19P17023 458 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 PRKACAP17612 351 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 KIR3DL2P43630 455 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 RBP2P50120 134 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 ZNF85Q03923 595 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 TMED1Q13445 227 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 GRK1Q15835 563 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 C2orf68Q2NKX9 166 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 TMEM244Q5VVB8 128 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 ASPHD2Q6ICH7 369 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 LHFPL4Q7Z7J7 247 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 TPRX1Q8N7U7 411 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 OR13C3Q8NGS6 347 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 FGGYQ96C11 551 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 ZNF714Q96N38 554 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 MTCH1Q9NZJ7 389 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 GLS2Q9UI32 602 aa13.13□□□□□ -0.31
IGHV3-42-201ENST00000520410 IGKV1-27A0A075B6S5 117 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 SNTNA6NMZ2 147 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 F8VVB4 439 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 F8VWA3 439 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 K7N7A8 449 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 SIRPB1O00241 398 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 PEX14O75381 377 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 TSPAN9O75954 239 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 CSF1P09603 554 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 VSIG10L2P0DP72 767 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 BCL3P20749 454 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 AZGP1P25311 298 aaKnown RBP13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 PEX2P28328 305 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 DUSP1P28562 367 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 MTCP1P56278 107 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 KPNB1Q14974 876 aaKnown RBP13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 CCDC121Q6ZUS5 278 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 ZNF676Q8N7Q3 588 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 NDNFQ8TB73 568 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 PP6455Q8WZ26 134 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 MRPL48Q96GC5 212 aaKnown RBP13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 NPFFR1Q9GZQ6 430 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 RBFOX1Q9NWB1 397 aaKnown RBP13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 ING3Q9NXR8 418 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 IL36RNQ9UBH0 155 aa13.12□□□□□ -0.31
IGHV3-42-201ENST00000520410 hADV38S2A0JD32 116 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 ZNF728P0DKX0 622 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 ATF1P18846 271 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 PRKACBP22694 351 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 ERVK11-1P61568 191 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 SSX2Q16385 188 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 HIST2H2BDQ6DRA6 164 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 C1QL4Q86Z23 238 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 Q8IYB0 196 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 ENTHD1Q8IYW4 607 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 OR8H2Q8N162 312 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 OR5D18Q8NGL1 313 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 OR2G2Q8NGZ5 317 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 PPP1R35Q8TAP8 253 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 FOXRED1Q96CU9 486 aaPredicted RBP13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 ADAT3Q96EY9 351 aaPredicted RBP13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 SNX22Q96L94 193 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 FOXJ3Q9UPW0 622 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 GSTK1Q9Y2Q3 226 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 PCDHGB5Q9Y5G0 923 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 GMPPBQ9Y5P6 360 aa13.11□□□□□ -0.31
IGHV3-42-201ENST00000520410 IGHA1P01876 353 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 NPBWR2P48146 333 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 RAB13P51153 203 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 OR12D2P58182 307 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 ACTA2P62736 377 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 ACTG2P63267 376 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 SCN1BQ07699 218 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 HERPUD1Q15011 391 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 PDLIM3Q53GG5 364 aaPredicted RBP13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 MEDAGQ5VYS4 303 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 Q6ZSR3 168 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 TMEM219Q86XT9 240 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 FAM58AQ8N1B3 248 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 KLHDC1Q8N7A1 406 aa13.1□□□□□ -0.31
IGHV3-42-201ENST00000520410 OR13C9Q8NGT0 318 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms