RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 MRPS28Q9Y2Q9 187 aaKnown RBP9.46□□□□□ -0.9
HTT-213ENST00000513806 IGKV1D-17A0A075B6S4 117 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 A0A0G2JK05 382 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 RFPL4AA6NLU0 287 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 RFPL4AL1F8VTS6 287 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 IFNL4K9M1U5 179 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 TNFRSF13BO14836 293 aaPredicted RBP9.45□□□□□ -0.9
HTT-213ENST00000513806 ADAM20O43506 726 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 ARL6IP5O75915 188 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 KDM4BO94953 1096 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 IGHV2-5P01817 119 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 SLC2A2P11168 524 aaPredicted RBP9.45□□□□□ -0.9
HTT-213ENST00000513806 MYL9P24844 172 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 CFHR2P36980 270 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 VBP1P61758 197 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 IKZF1Q13422 519 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 PIGYQ3MUY2 71 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 KIAA2026Q5HYC2 2103 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 TEX36Q5VZQ5 186 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 STUMQ69YW2 141 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 AWAT2Q6E213 333 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 GLIPR1L1Q6UWM5 242 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 GPR141Q7Z602 305 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 CD177Q8N6Q3 437 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 ANGPTL6Q8NI99 470 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 PHYHIPQ92561 330 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 FAM46BQ96A09 425 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 C1orf147Q96MC9 270 aaPredicted RBP9.45□□□□□ -0.9
HTT-213ENST00000513806 GAFA1Q96PS6 74 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 SLITRK2Q9H156 845 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 BANF2Q9H503 90 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 ZNF665Q9H7R5 613 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 HES4Q9HCC6 221 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 SCOCQ9UIL1 159 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 PCDHB10Q9UN67 800 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 GSTK1Q9Y2Q3 226 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 POLDIP2Q9Y2S7 368 aa9.45□□□□□ -0.9
HTT-213ENST00000513806 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.44□□□□□ -0.92e-6■■■■□ 19.3
HTT-213ENST00000513806 TRAV38-1A0A0B4J264 116 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 OR2AT4A6NND4 320 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 PHF1O43189 567 aaPredicted RBP9.44□□□□□ -0.9
HTT-213ENST00000513806 NOS1APO75052 506 aaPredicted RBP9.44□□□□□ -0.9
HTT-213ENST00000513806 CYB5AP00167 134 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 RPS2P15880 293 aaKnown RBP9.44□□□□□ -0.9
HTT-213ENST00000513806 ZFP36P26651 326 aaKnown RBP9.44□□□□□ -0.9
HTT-213ENST00000513806 FGF9P31371 208 aaPredicted RBP9.44□□□□□ -0.9
HTT-213ENST00000513806 RSU1Q15404 277 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 MICBQ29980 383 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 SLC22A6Q4U2R8 563 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 GLT8D1Q68CQ7 371 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 RTN4RL2Q86UN3 420 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 CLVS1Q8IUQ0 354 aaPredicted RBP9.44□□□□□ -0.9
HTT-213ENST00000513806 FAM58AQ8N1B3 248 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 PNLDC1Q8NA58 520 aaKnown RBP9.44□□□□□ -0.9
HTT-213ENST00000513806 THRSPQ92748 146 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 SLC25A28Q96A46 364 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 KCTD7Q96MP8 289 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 PATZ1Q9HBE1 687 aaKnown RBP9.44□□□□□ -0.9
HTT-213ENST00000513806 ZNF222Q9UK12 451 aa9.44□□□□□ -0.9
HTT-213ENST00000513806 ANK3Q12955 4377 aaKnown RBP9.44□□□□□ -0.9
HTT-213ENST00000513806 CSPG4Q6UVK1 2322 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 TRAV1-2A0A0B4J238 106 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 MEX3AA1L020 520 aaKnown RBP9.43□□□□□ -0.9
HTT-213ENST00000513806 MEGF11A6BM72 1044 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 F5H0A9 414 aaPredicted RBP9.43□□□□□ -0.9
HTT-213ENST00000513806 SIRPB1O00241 398 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 TMPRSS2O15393 492 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 WNT2P09544 360 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 IGHV4-31P0DP07 118 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 ZNF16P17020 682 aaPredicted RBP9.43□□□□□ -0.9
HTT-213ENST00000513806 RAB3BP20337 219 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 GALP22466 123 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 HTR2CP28335 458 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 SERPINB10P48595 397 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 LCN2P80188 198 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 COL10A1Q03692 680 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 SCN1BQ07699 218 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 LOXL1Q08397 574 aaPredicted RBP9.43□□□□□ -0.9
HTT-213ENST00000513806 DGUOKQ16854 277 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 TMEM249Q2WGJ8 235 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 SMIM21Q3B7S5 101 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 TMEM155Q4W5P6 130 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 C1orf100Q5SVJ3 147 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 ASCL4Q6XD76 172 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 SPNS3Q6ZMD2 512 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 ZNF841Q6ZN19 808 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 DCDC5Q6ZRR9 648 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 Q71RC1 249 aaPredicted RBP9.43□□□□□ -0.9
HTT-213ENST00000513806 MUC20Q8N307 709 aaPredicted RBP9.43□□□□□ -0.9
HTT-213ENST00000513806 SPICQ8N5J4 248 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 NKAIN3Q8N8D7 197 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 ZSCAN4Q8NAM6 433 aaPredicted RBP9.43□□□□□ -0.9
HTT-213ENST00000513806 ZNRF1Q8ND25 227 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 TMEM104Q8NE00 496 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 PXT1Q8NFP0 134 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 NDNFQ8TB73 568 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 COX4I2Q96KJ9 171 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 METTL9Q9H1A3 318 aa9.43□□□□□ -0.9
HTT-213ENST00000513806 GSX1Q9H4S2 264 aaPredicted RBP9.43□□□□□ -0.9
HTT-213ENST00000513806 PLGRKTQ9HBL7 147 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 298.8 ms