RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 TRAV40A0A0B4J280 105 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 TRBV2A0A0J9YWF9 115 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 TRBV5-5A0A0J9YX44 114 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 TMEM89A2RUT3 159 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 NKX6-3A6NJ46 265 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 M0R1W7 72 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 XPNPEP2O43895 674 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 KDM4BO94953 1096 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 NXPH2O95156 264 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 CD1AP06126 327 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 PRTN3P24158 256 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 LMO1P25800 156 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 C21orf33P30042 268 aaPredicted RBP7.97□□□□□ -1.13
RNF4-221ENST00000513643 NPBWR2P48146 333 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 ATP1B3P54709 279 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 DLX6P56179 175 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 MTCP1P56278 107 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 UBA52P62987 128 aaKnown RBP7.97□□□□□ -1.13
RNF4-221ENST00000513643 HCP5Q6MZN7 132 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 ASCL4Q6XD76 172 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 TMPRSS11AQ6ZMR5 421 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 LHFPL2Q6ZUX7 228 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 SERPINA12Q8IW75 414 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 SAXO1Q8IYX7 474 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 BPIFB2Q8N4F0 458 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.97□□□□□ -1.13
RNF4-221ENST00000513643 OR5D14Q8NGL3 314 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 TRMT10AQ8TBZ6 339 aaKnown RBP7.97□□□□□ -1.13
RNF4-221ENST00000513643 NPRL2Q8WTW4 380 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 SMIM19Q96E16 107 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 AJUBAQ96IF1 538 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 PGLYRP3Q96LB9 341 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 OPALINQ96PE5 141 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 JMJD8Q96S16 334 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 PCGF1Q9BSM1 259 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 RHOFQ9HBH0 211 aa7.97□□□□□ -1.13
RNF4-221ENST00000513643 IGHV1-69DA0A0B4J2H0 117 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 TMEM82A0PJX8 343 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 RNASEK-C17orf49H0YIS7 233 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 SULT1B1O43704 296 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 IGHV1-69P01742 117 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 TK1P04183 234 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 ALDOBP05062 364 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 CHRM2P08172 466 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 ZNF20P17024 532 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 IGFBP3P17936 291 aaPredicted RBP7.96□□□□□ -1.14
RNF4-221ENST00000513643 GABRA2P47869 451 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 CEBPDP49716 269 aaPredicted RBP7.96□□□□□ -1.14
RNF4-221ENST00000513643 AQP4P55087 323 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 ACSM1Q08AH1 577 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 RIPK1Q13546 671 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 IRF3Q14653 427 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 SLC9A3R2Q15599 337 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 DEFB112Q30KQ8 113 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 C6orf141Q5SZD1 244 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 METTL11BQ5VVY1 283 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 TMEM200BQ69YZ2 307 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 Q6YL49 198 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 C17orf107Q6ZR85 190 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 VMO1Q7Z5L0 202 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 LYPD6Q86Y78 171 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 MKXQ8IYA7 352 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 Q8IYB0 196 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 NANOGP1Q8N7R0 232 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 ZSCAN4Q8NAM6 433 aaPredicted RBP7.96□□□□□ -1.14
RNF4-221ENST00000513643 OR13C3Q8NGS6 347 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 OR13C9Q8NGT0 318 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 GPR148Q8TDV2 347 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 GATAD2BQ8WXI9 593 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 SLAMF9Q96A28 289 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 CDCA4Q9BXL8 241 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 MS4A7Q9GZW8 240 aaPredicted RBP7.96□□□□□ -1.14
RNF4-221ENST00000513643 COMMD4Q9H0A8 199 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 DUSP21Q9H596 190 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 METTL8Q9H825 291 aaKnown RBP7.96□□□□□ -1.14
RNF4-221ENST00000513643 ELL3Q9HB65 397 aaPredicted RBP7.96□□□□□ -1.14
RNF4-221ENST00000513643 HMG20AQ9NP66 347 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 NOX4Q9NPH5 578 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 C19orf12Q9NSK7 152 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 RBFOX1Q9NWB1 397 aaKnown RBP7.96□□□□□ -1.14
RNF4-221ENST00000513643 ZNF281Q9Y2X9 895 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 NBEAL1Q6ZS30 2694 aa7.96□□□□□ -1.14
RNF4-221ENST00000513643 IGHV3OR16-10A0A075B7F0 116 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 TRBV5-7A0A0A0MS05 114 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 TRIM77I1YAP6 450 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 RGS9O75916 674 aaPredicted RBP7.95□□□□□ -1.14
RNF4-221ENST00000513643 RNASE1P07998 156 aaKnown RBP7.95□□□□□ -1.14
RNF4-221ENST00000513643 MYL12AP19105 171 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 BCL3P20749 454 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 MYF6P23409 242 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 COL10A1Q03692 680 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 KISS1Q15726 138 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 GPR157Q5UAW9 335 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 ELP2Q6IA86 826 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 Q6P435 159 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 BRD3OSQ6XYD6 125 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 TCF23Q7RTU1 214 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 FAM58AQ8N1B3 248 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 TMEM86BQ8N661 226 aa7.95□□□□□ -1.14
RNF4-221ENST00000513643 PXT1Q8NFP0 134 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms