RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 ESCO2Q56NI9 601 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 ASCL4Q6XD76 172 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 LYPD6Q86Y78 171 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 FAM58AQ8N1B3 248 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 NKAIN3Q8N8D7 197 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 OR51E2Q9H255 320 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 GSX1Q9H4S2 264 aaPredicted RBP17.52■□□□□ 0.39
NEIL3-202ENST00000513321 CNTD2Q9H8S5 307 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 ELL3Q9HB65 397 aaPredicted RBP17.52■□□□□ 0.39
NEIL3-202ENST00000513321 EXOSC4Q9NPD3 245 aaKnown RBP17.52■□□□□ 0.39
NEIL3-202ENST00000513321 ING4Q9UNL4 249 aa17.52■□□□□ 0.39
NEIL3-202ENST00000513321 YLPM1P49750 1951 aaKnown RBP17.51■□□□□ 0.39
NEIL3-202ENST00000513321 KNG1P01042 644 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 TGFAP01135 160 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 PRDX2P32119 198 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 PITPNBP48739 271 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 C22orf42Q6IC83 251 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 CLEC9AQ6UXN8 241 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 ZNF841Q6ZN19 808 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 ZNF788Q6ZQV5 615 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 SLC36A1Q7Z2H8 476 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 DNTTIP1Q9H147 329 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 ZNF222Q9UK12 451 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 SSR3Q9UNL2 185 aa17.51■□□□□ 0.39
NEIL3-202ENST00000513321 A0A1B0GW55 424 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 PHF1O43189 567 aaPredicted RBP17.5■□□□□ 0.39
NEIL3-202ENST00000513321 CD5LO43866 347 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 CDRT1O95170 752 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 DUX4L2P0CJ85 424 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 DUX4L3P0CJ86 424 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 DUX4L4P0CJ87 422 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 DUX4L5P0CJ88 424 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 DUX4L6P0CJ89 424 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 DUX4L7P0CJ90 424 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 PRKACAP17612 351 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 GADD45AP24522 165 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 ZFP36P26651 326 aaKnown RBP17.5■□□□□ 0.39
NEIL3-202ENST00000513321 FGF9P31371 208 aaPredicted RBP17.5■□□□□ 0.39
NEIL3-202ENST00000513321 LCN2P80188 198 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 RSU1Q15404 277 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 GLT8D1Q68CQ7 371 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 DUX4L9Q6RFH8 374 aaPredicted RBP17.5■□□□□ 0.39
NEIL3-202ENST00000513321 CD177Q8N6Q3 437 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 FAM216BQ8N7L0 139 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 MED30Q96HR3 178 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 S100A13Q99584 98 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 SSBP3Q9BWW4 388 aaPredicted RBP17.5■□□□□ 0.39
NEIL3-202ENST00000513321 MRPS26Q9BYN8 205 aaKnown RBP17.5■□□□□ 0.39
NEIL3-202ENST00000513321 RHOFQ9HBH0 211 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 HMG20AQ9NP66 347 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 TXNL4BQ9NX01 149 aaKnown RBP17.5■□□□□ 0.39
NEIL3-202ENST00000513321 IL36RNQ9UBH0 155 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 DUX4Q9UBX2 424 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 CLN8Q9UBY8 286 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 OR14J1Q9UGF5 321 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 ABCA1O95477 2261 aa17.5■□□□□ 0.39
NEIL3-202ENST00000513321 NKX6-3A6NJ46 265 aa17.49■□□□□ 0.39
NEIL3-202ENST00000513321 FOXH1O75593 365 aa17.49■□□□□ 0.39
NEIL3-202ENST00000513321 MSMBP08118 114 aa17.49■□□□□ 0.39
NEIL3-202ENST00000513321 ZNF16P17020 682 aaPredicted RBP17.49■□□□□ 0.39
NEIL3-202ENST00000513321 CEBPDP49716 269 aaPredicted RBP17.49■□□□□ 0.39
NEIL3-202ENST00000513321 GNB2P62879 340 aa17.49■□□□□ 0.39
NEIL3-202ENST00000513321 WDR25Q64LD2 544 aaPredicted RBP17.49■□□□□ 0.39
NEIL3-202ENST00000513321 OR4D6Q8NGJ1 314 aa17.49■□□□□ 0.39
NEIL3-202ENST00000513321 OR10K1Q8NGX5 313 aa17.49■□□□□ 0.39
NEIL3-202ENST00000513321 FOXRED1Q96CU9 486 aaPredicted RBP17.49■□□□□ 0.39
NEIL3-202ENST00000513321 GAFA1Q96PS6 74 aa17.49■□□□□ 0.39
NEIL3-202ENST00000513321 CHCHD6Q9BRQ6 235 aa17.49■□□□□ 0.39
NEIL3-202ENST00000513321 UQCC2Q9BRT2 126 aa17.49■□□□□ 0.39
NEIL3-202ENST00000513321 METTL9Q9H1A3 318 aa17.49■□□□□ 0.39
NEIL3-202ENST00000513321 MRPS28Q9Y2Q9 187 aaKnown RBP17.49■□□□□ 0.39
NEIL3-202ENST00000513321 AK6Q9Y3D8 172 aaKnown RBP17.49■□□□□ 0.39
NEIL3-202ENST00000513321 TRAV1-2A0A0B4J238 106 aa17.48■□□□□ 0.39
NEIL3-202ENST00000513321 DVL1O14640 695 aa17.48■□□□□ 0.39
NEIL3-202ENST00000513321 CD37P11049 281 aa17.48■□□□□ 0.39
NEIL3-202ENST00000513321 IL13RA1P78552 427 aa17.48■□□□□ 0.39
NEIL3-202ENST00000513321 IKZF1Q13422 519 aa17.48■□□□□ 0.39
NEIL3-202ENST00000513321 FIP1L1Q6UN15 594 aaKnown RBP17.48■□□□□ 0.39
NEIL3-202ENST00000513321 YIPF6Q96EC8 236 aa17.48■□□□□ 0.39
NEIL3-202ENST00000513321 SDSLQ96GA7 329 aa17.48■□□□□ 0.39
NEIL3-202ENST00000513321 GSTK1Q9Y2Q3 226 aa17.48■□□□□ 0.39
NEIL3-202ENST00000513321 MAB21L2Q9Y586 359 aa17.48■□□□□ 0.39
NEIL3-202ENST00000513321 KIAA1324LA8MWY0 1029 aaPredicted RBP17.47■□□□□ 0.39
NEIL3-202ENST00000513321 SIGLEC5O15389 551 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 NDUFB3O43676 98 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 FCN3O75636 299 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 HTR3BO95264 441 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 SELLP14151 372 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 DUSP1P28562 367 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 MTNR1BP49286 362 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 SNU13P55769 128 aaKnown RBP17.47■□□□□ 0.39
NEIL3-202ENST00000513321 DGUOKQ16854 277 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 ELP2Q6IA86 826 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 GLIPR1L1Q6UWM5 242 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 GFI1Q99684 422 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 METRNQ9UJH8 293 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 ABCA2Q9BZC7 2435 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 LOC100506127A0A0U1RQW1 187 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 SHISA3A0PJX4 238 aa17.47■□□□□ 0.39
NEIL3-202ENST00000513321 A8MXK9 166 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms