RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 WISP1O95388 367 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 HKR1P10072 659 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 IAPPP10997 89 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 EIF1P41567 113 aaKnown RBP13.09□□□□□ -0.31
USP38-202ENST00000510377 SULT1A2P50226 295 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 AADACL3Q5VUY0 350 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 IL22RA1Q8N6P7 574 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 NAA60Q9H7X0 242 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 GAR1Q9NY12 217 aaKnown RBP13.09□□□□□ -0.31
USP38-202ENST00000510377 STRAPQ9Y3F4 350 aaKnown RBP13.09□□□□□ -0.31
USP38-202ENST00000510377 LHFPL6Q9Y693 200 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 AP4M1O00189 453 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 TNFSF11O14788 317 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 THBS4P35443 961 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 OR2T2Q6IF00 324 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 ZNF774Q6NX45 483 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 PAQR4Q8N4S7 273 aaPredicted RBP13.09□□□□□ -0.31
USP38-202ENST00000510377 OR5C1Q8NGR4 320 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 PP6455Q8WZ26 134 aa13.09□□□□□ -0.31
USP38-202ENST00000510377 ZMAT5Q9UDW3 170 aaKnown RBP13.09□□□□□ -0.31
USP38-202ENST00000510377 TRAPPC2LH3BP13 241 aa13.08□□□□□ -0.31
USP38-202ENST00000510377 IFNA1P01562 189 aa13.08□□□□□ -0.31
USP38-202ENST00000510377 ISG15P05161 165 aa13.08□□□□□ -0.31
USP38-202ENST00000510377 OR8G2PQ6IF36 304 aa13.08□□□□□ -0.31
USP38-202ENST00000510377 WDR5BQ86VZ2 330 aa13.08□□□□□ -0.31
USP38-202ENST00000510377 ADAMTS17Q8TE56 1095 aa13.08□□□□□ -0.31
USP38-202ENST00000510377 SLC25A43Q8WUT9 341 aaPredicted RBP13.08□□□□□ -0.31
USP38-202ENST00000510377 ERGIC1Q969X5 290 aa13.08□□□□□ -0.31
USP38-202ENST00000510377 FAM117AQ9C073 453 aa13.08□□□□□ -0.31
USP38-202ENST00000510377 SLC2A8Q9NY64 477 aa13.08□□□□□ -0.31
USP38-202ENST00000510377 RALGAPA1Q6GYQ0 2036 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 DUSP3P51452 185 aaPredicted RBP13.08□□□□□ -0.32
USP38-202ENST00000510377 IGLV3-21P80748 117 aaPredicted RBP13.08□□□□□ -0.32
USP38-202ENST00000510377 PLGLB1Q02325 96 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 VAX1Q5SQQ9 334 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 ZNF429Q86V71 674 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 SDSLQ96GA7 329 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 ACACAQ13085 2346 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 A0A096LPE4 126 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 A0A1W2PPZ6 126 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 GEMIN2O14893 280 aaKnown RBP13.08□□□□□ -0.32
USP38-202ENST00000510377 IL2RAP01589 272 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 IGFBP3P17936 291 aaPredicted RBP13.08□□□□□ -0.32
USP38-202ENST00000510377 PIGYQ3MUY2 71 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 OSR2Q8N2R0 312 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 PSMF1Q92530 271 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 HIST1H2BAQ96A08 127 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 UCN2Q96RP3 112 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 SH3BGRL3Q9H299 93 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 PARP11Q9NR21 331 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 WSB1Q9Y6I7 421 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 NBASA2RRP1 2371 aa13.08□□□□□ -0.32
USP38-202ENST00000510377 DHRS7CA6NNS2 312 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 TMEM14DPA8MWL7 114 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 HMGB3O15347 200 aaKnown RBP13.07□□□□□ -0.32
USP38-202ENST00000510377 SMIM6P0DI80 62 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 ADCYAP1P18509 176 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 TMEM50BP56557 158 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 ESPL1Q14674 2120 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 APCDD1LQ8NCL9 501 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 ESRP2Q9H6T0 727 aaKnown RBP13.07□□□□□ -0.32
USP38-202ENST00000510377 FABP4P15090 132 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 ZNF708P17019 499 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 TCN2P20062 427 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 PPP1CCP36873 323 aaKnown RBP13.07□□□□□ -0.32
USP38-202ENST00000510377 CARD18P57730 90 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 UBALD2Q8IYN6 164 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 HPSE2Q8WWQ2 592 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 AQP10Q96PS8 301 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 CRLF2Q9HC73 371 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 KIAA1671Q9BY89 1806 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 CXCL13O43927 109 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 CTSDP07339 412 aaPredicted RBP13.07□□□□□ -0.32
USP38-202ENST00000510377 MDKP21741 143 aaPredicted RBP13.07□□□□□ -0.32
USP38-202ENST00000510377 GDF1P27539 372 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 ANKRD37Q7Z713 158 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 OR2C3Q8N628 320 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 CLEC1BQ9P126 229 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 LOC102725191A0A1B0GVB3 256 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 ADAM20O43506 726 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 RAMP1O60894 148 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 SPACA9Q96E40 222 aaPredicted RBP13.07□□□□□ -0.32
USP38-202ENST00000510377 MYOZ1Q9NP98 299 aaPredicted RBP13.07□□□□□ -0.32
USP38-202ENST00000510377 SLC2A9Q9NRM0 540 aa13.07□□□□□ -0.32
USP38-202ENST00000510377 PHOX2AO14813 284 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 EIF1BO60739 113 aaKnown RBP13.06□□□□□ -0.32
USP38-202ENST00000510377 HBE1P02100 147 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 IGKV3-11P04433 115 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 RPS16P62249 146 aaKnown RBP13.06□□□□□ -0.32
USP38-202ENST00000510377 TMPRSS5Q9H3S3 457 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 MYOTQ9UBF9 498 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 A0A1B0GTQ1 180 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 OR2B11Q5JQS5 317 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 SPEM1Q8N4L4 309 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 RPUSD4Q96CM3 377 aaKnown RBP13.06□□□□□ -0.32
USP38-202ENST00000510377 EDEM2Q9BV94 578 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 OR14J1Q9UGF5 321 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 ZNF587BE7ETH6 402 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 PIAS2O75928 621 aa13.06□□□□□ -0.32
USP38-202ENST00000510377 IFNA10P01566 189 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms