RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 CHST5Q9GZS9 411 aa14.01□□□□□ -0.17
SGMS1-204ENST00000492601 FBLN5Q9UBX5 448 aa14.01□□□□□ -0.17
SGMS1-204ENST00000492601 FUT6P51993 359 aa14□□□□□ -0.17
SGMS1-204ENST00000492601 EDDM3BP56851 147 aa14□□□□□ -0.17
SGMS1-204ENST00000492601 CDC42P60953 191 aa14□□□□□ -0.17
SGMS1-204ENST00000492601 HIST2H2BDQ6DRA6 164 aa14□□□□□ -0.17
SGMS1-204ENST00000492601 SLC25A26Q70HW3 274 aa14□□□□□ -0.17
SGMS1-204ENST00000492601 FAM220AQ7Z4H9 259 aa14□□□□□ -0.17
SGMS1-204ENST00000492601 EGFL6Q8IUX8 553 aa14□□□□□ -0.17
SGMS1-204ENST00000492601 OR4C13Q8NGP0 309 aa14□□□□□ -0.17
SGMS1-204ENST00000492601 PYDC1Q8WXC3 89 aa14□□□□□ -0.17
SGMS1-204ENST00000492601 RFKQ969G6 155 aa14□□□□□ -0.17
SGMS1-204ENST00000492601 BORCS8Q96FH0 119 aa14□□□□□ -0.17
SGMS1-204ENST00000492601 ZNF737O75373 536 aa13.99□□□□□ -0.17
SGMS1-204ENST00000492601 SERPINA3P01011 423 aa13.99□□□□□ -0.17
SGMS1-204ENST00000492601 CHRM2P08172 466 aa13.99□□□□□ -0.17
SGMS1-204ENST00000492601 TMED1Q13445 227 aa13.99□□□□□ -0.17
SGMS1-204ENST00000492601 EDDM3AQ14507 147 aa13.99□□□□□ -0.17
SGMS1-204ENST00000492601 AANATQ16613 207 aa13.99□□□□□ -0.17
SGMS1-204ENST00000492601 CRIP3Q6Q6R5 217 aa13.99□□□□□ -0.17
SGMS1-204ENST00000492601 GDPD3Q7L5L3 318 aa13.99□□□□□ -0.17
SGMS1-204ENST00000492601 DYNAPQ8N1N2 210 aa13.99□□□□□ -0.17
SGMS1-204ENST00000492601 EMG1Q92979 244 aaKnown RBP13.99□□□□□ -0.17
SGMS1-204ENST00000492601 RNF166Q96A37 237 aaPredicted RBP13.99□□□□□ -0.17
SGMS1-204ENST00000492601 IMPAD1Q9NX62 359 aa13.99□□□□□ -0.17
SGMS1-204ENST00000492601 IL36RNQ9UBH0 155 aa13.99□□□□□ -0.17
SGMS1-204ENST00000492601 NOTCH3Q9UM47 2321 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 TMEM82A0PJX8 343 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 C17orf98A8MV24 154 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 CHST1O43916 411 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 ENTPD6O75354 484 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 ARG1P05089 322 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 UBCP0CG48 685 aaKnown RBP13.98□□□□□ -0.17
SGMS1-204ENST00000492601 ZNF728P0DKX0 622 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 POU3F4P49335 361 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 RAB13P51153 203 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 EFNB2P52799 333 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 ISL1P61371 349 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 C2orf68Q2NKX9 166 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 OR8H2Q8N162 312 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 C11orf44Q8N8P7 122 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 CCDC54Q8NEL0 328 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 PIFOQ8TCI5 191 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 ADAT3Q96EY9 351 aaPredicted RBP13.98□□□□□ -0.17
SGMS1-204ENST00000492601 NKX3-1Q99801 234 aaPredicted RBP13.98□□□□□ -0.17
SGMS1-204ENST00000492601 RAB18Q9NP72 206 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 FOXJ3Q9UPW0 622 aa13.98□□□□□ -0.17
SGMS1-204ENST00000492601 IGHA1P01876 353 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 CSF1P09603 554 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 CALCBP10092 127 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 BCL3P20749 454 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 DUSP1P28562 367 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 KIR2DS4P43632 304 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 NPBWR2P48146 333 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 RBP2P50120 134 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 ATP1B3P54709 279 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 SNU13P55769 128 aaKnown RBP13.97□□□□□ -0.17
SGMS1-204ENST00000492601 CNN3Q15417 329 aaKnown RBP13.97□□□□□ -0.17
SGMS1-204ENST00000492601 ZIK1Q3SY52 487 aaPredicted RBP13.97□□□□□ -0.17
SGMS1-204ENST00000492601 Q6ZTK2 550 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 TPRX1Q8N7U7 411 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 OR13D1Q8NGV5 346 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 OR2G2Q8NGZ5 317 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 OR2T6Q8NHC8 308 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 PP6455Q8WZ26 134 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 RNFT2Q96EX2 444 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 SNX22Q96L94 193 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 CHST6Q9GZX3 395 aa13.97□□□□□ -0.17
SGMS1-204ENST00000492601 RBFOX1Q9NWB1 397 aaKnown RBP13.97□□□□□ -0.17
SGMS1-204ENST00000492601 IGKV1-9A0A0C4DH69 117 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 DAPL1A0PJW8 107 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 MEGF11A6BM72 1044 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 FAM90A8PA6NJQ4 464 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 EI24O14681 340 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 HAND1O96004 215 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 ALPLP05186 524 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 IGHV1-8P0DP01 117 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 ZNF20P17024 532 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 GABRR1P24046 479 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 MTCP1P56278 107 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 OR12D2P58182 307 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 NANOS3P60323 173 aaKnown RBP13.96□□□□□ -0.17
SGMS1-204ENST00000492601 DYNC1I2Q13409 638 aaKnown RBP13.96□□□□□ -0.17
SGMS1-204ENST00000492601 HERPUD1Q15011 391 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 FAM189A2Q15884 450 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 SSX2Q16385 188 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 LDLRAD2Q5SZI1 272 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 TCF23Q7RTU1 214 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 C1QL4Q86Z23 238 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 KLHDC1Q8N7A1 406 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 OR52N4Q8NGI2 321 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 TRUB1Q8WWH5 349 aaKnown RBP13.96□□□□□ -0.17
SGMS1-204ENST00000492601 RFT1Q96AA3 541 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 FGGYQ96C11 551 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 C10orf35Q96D05 121 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 NPFFR1Q9GZQ6 430 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 FRRS1LQ9P0K9 344 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 AASSQ9UDR5 926 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 ORC6Q9Y5N6 252 aa13.96□□□□□ -0.17
SGMS1-204ENST00000492601 ODF3BA8MYP8 253 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms