RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 KRTAP10-9P60411 292 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 C2orf76Q3KRA6 126 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 ZNF404Q494X3 552 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 UBE2NLQ5JXB2 153 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 ELP2Q6IA86 826 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 ASCL4Q6XD76 172 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 ACP7Q6ZNF0 438 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 NLRC3Q7RTR2 1065 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 SLC36A1Q7Z2H8 476 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 OR51T1Q8NGJ9 327 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 OR10K1Q8NGX5 313 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 LGALS14Q8TCE9 139 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 DYNC2LI1Q8TCX1 351 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 IGFBPL1Q8WX77 278 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 FAM46BQ96A09 425 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 PTX4Q96A99 478 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 POM121Q96HA1 1249 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 GFI1Q99684 422 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 NKX3-1Q99801 234 aaPredicted RBP9.22□□□□□ -0.93
VARS2-210ENST00000490699 TMUB1Q9BVT8 246 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 SELENOIQ9C0D9 397 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 C6orf62Q9GZU0 229 aaPredicted RBP9.22□□□□□ -0.93
VARS2-210ENST00000490699 HMG20AQ9NP66 347 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 RBFOX1Q9NWB1 397 aaKnown RBP9.22□□□□□ -0.93
VARS2-210ENST00000490699 MTCH1Q9NZJ7 389 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 COMMD3Q9UBI1 195 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 OR14J1Q9UGF5 321 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 SPATA2Q9UM82 520 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 ST3GAL6Q9Y274 331 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 TANC2Q9HCD6 1990 aa9.22□□□□□ -0.93
VARS2-210ENST00000490699 A0A0G2JK05 382 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 OR2AT4A6NND4 320 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 FAM25AB3EWG3 89 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 FAM25CB3EWG5 89 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 FAM25GB3EWG6 89 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 WIPF1O43516 503 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 LY6HO94772 140 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 FSTL3O95633 263 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 CD37P11049 281 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 SNRPBP14678 240 aaKnown RBP9.21□□□□□ -0.94
VARS2-210ENST00000490699 ZNF44P15621 663 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 COL8A2P25067 703 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 GABRA2P47869 451 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 SNU13P55769 128 aaKnown RBP9.21□□□□□ -0.94
VARS2-210ENST00000490699 RBM11P57052 281 aaKnown RBP9.21□□□□□ -0.94
VARS2-210ENST00000490699 MRPS15P82914 257 aaKnown RBP9.21□□□□□ -0.94
VARS2-210ENST00000490699 PRR20EP86478 221 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 PRR20CP86479 221 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 PRR20DP86480 221 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 PRR20BP86481 221 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 PRR20AP86496 221 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 IKZF1Q13422 519 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 IL13RA2Q14627 380 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 ARL6IP1Q15041 203 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 MPV17LQ2QL34 196 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 SFRP4Q6FHJ7 346 aaPredicted RBP9.21□□□□□ -0.94
VARS2-210ENST00000490699 RAB12Q6IQ22 244 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 FAM166AQ6J272 317 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 C11orf53Q8IXP5 236 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 BATF2Q8N1L9 274 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 GCSAMQ8N6F7 178 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 ZNF525Q8N782 197 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 SAMD12Q8N8I0 201 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 DEFB108BQ8NET1 73 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 OR56B1Q8NGI3 324 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 RAB40AQ8WXH6 277 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 YIPF5Q969M3 257 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 S100A16Q96FQ6 103 aaKnown RBP9.21□□□□□ -0.94
VARS2-210ENST00000490699 ZNF488Q96MN9 340 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 CMTM3Q96MX0 182 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 NEDD4LQ96PU5 975 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 GAL3ST1Q99999 423 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 DNTTIP1Q9H147 329 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 ATG5Q9H1Y0 275 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 MMP27Q9H306 513 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 DIABLOQ9NR28 239 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 FBLN5Q9UBX5 448 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 WIPI2Q9Y4P8 454 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 CACNG2Q9Y698 323 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 CACNA1DQ01668 2161 aa9.21□□□□□ -0.94
VARS2-210ENST00000490699 PTPN13Q12923 2485 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 IGKV1-12A0A0C4DH73 117 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 TMEM272A0A1B0GTI8 110 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 FAM90A10PA6NDY2 464 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 FAM90A18PA6NE21 464 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 FAM90A16PA6NEW6 464 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 FAM90A20PA6NIJ5 464 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 FAM90A8PA6NJQ4 464 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 FAM90A7PA6NKC0 464 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 FAM90A22PA8MWA6 464 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 FAM90A12PA8MX19 464 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 FAM90A5PA8MXJ8 464 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 FAM90A23PA8MXZ1 464 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 LYNX1G3V0Z9 82 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 DEGS1O15121 323 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 NDUFS7O75251 213 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 RP2O75695 350 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 OR7C1O76099 320 aaPredicted RBP9.2□□□□□ -0.94
VARS2-210ENST00000490699 HAND1O96004 215 aa9.2□□□□□ -0.94
VARS2-210ENST00000490699 LHBP01229 141 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms