RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	SLAMF9	Q96A28	289 aa		10.12	□□□□□ -0.79
SREBF1-215	ENST00000487401	EME1	Q96AY2	570 aa		10.12	□□□□□ -0.79
SREBF1-215	ENST00000487401	BORCS8	Q96FH0	119 aa		10.12	□□□□□ -0.79
SREBF1-215	ENST00000487401	AJUBA	Q96IF1	538 aa		10.12	□□□□□ -0.79
SREBF1-215	ENST00000487401	OSBPL10	Q9BXB5	764 aa		10.12	□□□□□ -0.79
SREBF1-215	ENST00000487401	GABARAPL3	Q9BY60	117 aa		10.12	□□□□□ -0.79
SREBF1-215	ENST00000487401	IMPAD1	Q9NX62	359 aa		10.12	□□□□□ -0.79
SREBF1-215	ENST00000487401	OAZ3	Q9UMX2	235 aa		10.12	□□□□□ -0.79
SREBF1-215	ENST00000487401	SIGLEC9	Q9Y336	463 aa		10.12	□□□□□ -0.79
SREBF1-215	ENST00000487401	ORC6	Q9Y5N6	252 aa		10.12	□□□□□ -0.79
SREBF1-215	ENST00000487401	CYB5A	P00167	134 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	CSF1	P09603	554 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	UBC	P0CG48	685 aa	Known RBP	10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	ZNF728	P0DKX0	622 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	PAX6	P26367	422 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	ATP1B3	P54709	279 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	HERPUD1	Q15011	391 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	CNN3	Q15417	329 aa	Known RBP	10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	C11orf88	Q6PI97	169 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	LIAT1	Q6ZQX7	453 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	SLC25A26	Q70HW3	274 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	ENTHD1	Q8IYW4	607 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	RDH10	Q8IZV5	341 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	PRSS35	Q8N3Z0	413 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	OR2T6	Q8NHC8	308 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	PPP1R35	Q8TAP8	253 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	TRUB1	Q8WWH5	349 aa	Known RBP	10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	EMG1	Q92979	244 aa	Known RBP	10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	C10orf35	Q96D05	121 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	NKX3-1	Q99801	234 aa	Predicted RBP	10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	NPFFR1	Q9GZQ6	430 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	CHST5	Q9GZS9	411 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	ABCB10	Q9NRK6	738 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	MTCH1	Q9NZJ7	389 aa		10.11	□□□□□ -0.79
SREBF1-215	ENST00000487401	IGKV1-27	A0A075B6S5	117 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	LOC107986453	A0A1B0GWG9	222 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	C17orf98	A8MV24	154 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401		F8VVB4	439 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401		F8VWA3	439 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	TSPAN15	O95858	294 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	ARG1	P05089	322 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	OCM2	P0CE71	109 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	OCM	P0CE72	109 aa	Predicted RBP	10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	ZNF20	P17024	532 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	PRKACB	P22694	351 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	GABRR1	P24046	479 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	MEF2C	Q06413	473 aa	Predicted RBP	10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	DYNC1I2	Q13409	638 aa	Known RBP	10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	EDDM3A	Q14507	147 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	FAM189A2	Q15884	450 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	TP53I3	Q53FA7	332 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	TMEM244	Q5VVB8	128 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	KCTD20	Q7Z5Y7	419 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401		Q8IYB0	196 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	PP6455	Q8WZ26	134 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	SNX22	Q96L94	193 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	RANBP3	Q9H6Z4	567 aa	Predicted RBP	10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	GLS2	Q9UI32	602 aa		10.1	□□□□□ -0.79
SREBF1-215	ENST00000487401	hADV38S2	A0JD32	116 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	DAPL1	A0PJW8	107 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	MEX3A	A1L020	520 aa	Known RBP	10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	FAM90A8P	A6NJQ4	464 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	VGLL3	A8MV65	326 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	ENTPD6	O75354	484 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	ZNF737	O75373	536 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	HAND1	O96004	215 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	RBP4	P02753	201 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	PEX2	P28328	305 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	POU3F4	P49335	361 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	RBP2	P50120	134 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	EFNB2	P52799	333 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	DLX6	P56179	175 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	MTCP1	P56278	107 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	ACTC1	P68032	377 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	ACTA1	P68133	377 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	ZNF85	Q03923	595 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	GRK1	Q15835	563 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	PLA1A	Q53H76	456 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	LHFPL4	Q7Z7J7	247 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	OR8H2	Q8N162	312 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	DNAAF1	Q8NEP3	725 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	OR2G2	Q8NGZ5	317 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	PIFO	Q8TCI5	191 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	FGGY	Q96C11	551 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	MALSU1	Q96EH3	234 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	RNFT2	Q96EX2	444 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	ZNF714	Q96N38	554 aa		10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	TBL2	Q9Y4P3	447 aa	Known RBP	10.09	□□□□□ -0.79
SREBF1-215	ENST00000487401	TMEM82	A0PJX8	343 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	SNTN	A6NMZ2	147 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401		H3BUI4	141 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	SLC16A6	O15403	523 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	IGHV1-8	P0DP01	117 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	VSIG10L2	P0DP72	767 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	ATF1	P18846	271 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	KIR3DL2	P43630	455 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	RAB13	P51153	203 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	OR12D2	P58182	307 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	ISL1	P61371	349 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms