RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 MED30Q96HR3 178 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 COX4I2Q96KJ9 171 aa9.53□□□□□ -0.88
NUP50-216ENST00000486184 NKX3-1Q99801 234 aaPredicted RBP9.53□□□□□ -0.88
NUP50-216ENST00000486184 PPIL3Q9H2H8 161 aaKnown RBP9.53□□□□□ -0.88
NUP50-216ENST00000486184 PATZ1Q9HBE1 687 aaKnown RBP9.53□□□□□ -0.88
NUP50-216ENST00000486184 RBFOX1Q9NWB1 397 aaKnown RBP9.53□□□□□ -0.88
NUP50-216ENST00000486184 AK6Q9Y3D8 172 aaKnown RBP9.53□□□□□ -0.88
NUP50-216ENST00000486184 MAP1AP78559 2803 aaPredicted RBP9.53□□□□□ -0.88
NUP50-216ENST00000486184 FLNAP21333 2647 aaKnown RBP9.52□□□□□ -0.88
NUP50-216ENST00000486184 TRAV1-2A0A0B4J238 106 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 NDUFB3O43676 98 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 CDRT1O95170 752 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 KNG1P01042 644 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 INHBBP09529 407 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 FOSL1P15407 271 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 ADRA2CP18825 462 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 RAB3BP20337 219 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 SERPINA2P20848 420 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 HTR2CP28335 458 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 NPBWR2P48146 333 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 PITPNBP48739 271 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 MTNR1BP49286 362 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 ERVK11-1P61568 191 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 GNB2P62879 340 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 IL13RA1P78552 427 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 TMEM249Q2WGJ8 235 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 SPIN3Q5JUX0 258 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 STUMQ69YW2 141 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 GLIPR1L1Q6UWM5 242 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 TPRA1Q86W33 373 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 CIARTQ8N365 385 aaPredicted RBP9.52□□□□□ -0.89
NUP50-216ENST00000486184 OR6M1Q8NGM8 313 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 SEH1LQ96EE3 360 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 CCL13Q99616 98 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 DNTTIP1Q9H147 329 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 CNTD2Q9H8S5 307 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 HES4Q9HCC6 221 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 CLN8Q9UBY8 286 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 V9GY05 133 aa9.52□□□□□ -0.89
NUP50-216ENST00000486184 CSMD1Q96PZ7 3565 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 A0A096LNT2 108 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 IGKV1-12A0A0C4DH73 117 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 RFPL4AA6NLU0 287 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 B4DSR2 109 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 RFPL4AL1F8VTS6 287 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 NOL3O60936 208 aaKnown RBP9.51□□□□□ -0.89
NUP50-216ENST00000486184 FOXH1O75593 365 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 IGKV1D-12P01611 117 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 UBBP0CG47 229 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 CALCBP10092 127 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 PSG2P11465 335 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 IL2RGP31785 369 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 RPL5P46777 297 aaKnown RBP9.51□□□□□ -0.89
NUP50-216ENST00000486184 NPY4RP50391 375 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 CAPZA1P52907 286 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 LMO4P61968 165 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 LSM3P62310 102 aaKnown RBP9.51□□□□□ -0.89
NUP50-216ENST00000486184 IKZF1Q13422 519 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 RAB11BQ15907 218 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 SLC22A6Q4U2R8 563 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 LRRC10Q5BKY1 277 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 CYB5R2Q6BCY4 276 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 CRIP3Q6Q6R5 217 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 LYPD2Q6UXB3 125 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 LINC01356Q8N9X3 169 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 OR10K1Q8NGX5 313 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 ANGPTL6Q8NI99 470 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 TBC1D15Q8TC07 691 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 FUNDC2Q9BWH2 189 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 SSBP3Q9BWW4 388 aaPredicted RBP9.51□□□□□ -0.89
NUP50-216ENST00000486184 CST11Q9H112 138 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 HMG20AQ9NP66 347 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 IL36GQ9NZH8 169 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 KAAG1Q9UBP8 84 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 GHRLQ9UBU3 117 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 OR5V1Q9UGF6 321 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 OTOGQ6ZRI0 2925 aa9.51□□□□□ -0.89
NUP50-216ENST00000486184 IGKV1D-17A0A075B6S4 117 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 FAM157AC9JC47 383 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 F5H0A9 414 aaPredicted RBP9.5□□□□□ -0.89
NUP50-216ENST00000486184 F8VVB4 439 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 F8VWA3 439 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 SLC17A2O00624 439 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 SH2D1BO14796 132 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 CRTAPO75718 401 aaPredicted RBP9.5□□□□□ -0.89
NUP50-216ENST00000486184 HAND1O96004 215 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 SFTPBP07988 381 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 CHRM2P08172 466 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 WNT2P09544 360 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 IGHV4-31P0DP07 118 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 GTF2F2P13984 249 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 ZNF44P15621 663 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 ZNF16P17020 682 aaPredicted RBP9.5□□□□□ -0.89
NUP50-216ENST00000486184 PRDX2P32119 198 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 ALDH3B2P48448 385 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 FGF12P61328 243 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 MXD1Q05195 221 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 SCN1BQ07699 218 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 DGUOKQ16854 277 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 C1orf100Q5SVJ3 147 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms