RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 RTL8AQ9BWD3 113 aa14.64□□□□□ -0.07
PTPN7-209ENST00000477554 OR51I2Q9H344 312 aa14.64□□□□□ -0.07
PTPN7-209ENST00000477554 CLN8Q9UBY8 286 aa14.64□□□□□ -0.07
PTPN7-209ENST00000477554 ZNF69Q9UC07 566 aa14.64□□□□□ -0.07
PTPN7-209ENST00000477554 TRBV5-7A0A0A0MS05 114 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 ANXA2P2A6NMY6 339 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 SRRM5B3KS81 715 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 ZNF701M0R085 212 aaPredicted RBP14.63□□□□□ -0.07
PTPN7-209ENST00000477554 PRB3Q04118 309 aaPredicted RBP14.63□□□□□ -0.07
PTPN7-209ENST00000477554 HSD17B12Q53GQ0 312 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 OR5D14Q8NGL3 314 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 RAB40AQ8WXH6 277 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 PP6455Q8WZ26 134 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 ISOC1Q96CN7 298 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 KCTD7Q96MP8 289 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 ZNF48Q96MX3 618 aaPredicted RBP14.63□□□□□ -0.07
PTPN7-209ENST00000477554 NUDT16L1Q9BRJ7 211 aaKnown RBP14.63□□□□□ -0.07
PTPN7-209ENST00000477554 FAM192AQ9GZU8 254 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 NAA50Q9GZZ1 169 aaKnown RBP14.63□□□□□ -0.07
PTPN7-209ENST00000477554 RBM38Q9H0Z9 239 aaKnown RBP14.63□□□□□ -0.07
PTPN7-209ENST00000477554 NOX4Q9NPH5 578 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 CKLFQ9UBR5 152 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 STAB1Q9NY15 2570 aa14.63□□□□□ -0.07
PTPN7-209ENST00000477554 A6NHS1 94 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 DVL1O14640 695 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 TCF21O43680 179 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 SYNGR1O43759 233 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 SFTPBP07988 381 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 GATA3P23771 443 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 CALRP27797 417 aaKnown RBP14.62□□□□□ -0.07
PTPN7-209ENST00000477554 DLX1P56177 255 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 CTF1Q16619 201 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 CEACAM21Q3KPI0 293 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 PLCXD3Q63HM9 321 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 TMEM42Q69YG0 159 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.62□□□□□ -0.07
PTPN7-209ENST00000477554 NANPQ8TBE9 248 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 DGCR14Q96DF8 476 aaKnown RBP14.62□□□□□ -0.07
PTPN7-209ENST00000477554 CENPOQ9BU64 300 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 SLITRK2Q9H156 845 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 RSL24D1Q9UHA3 163 aaKnown RBP14.62□□□□□ -0.07
PTPN7-209ENST00000477554 FOXJ3Q9UPW0 622 aa14.62□□□□□ -0.07
PTPN7-209ENST00000477554 TRAV38-1A0A0B4J264 116 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 KIR2DS1A0A191URI9 304 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 MDFIC2A0A1B0GVS7 189 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 A0A1W2PPK0 400 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 SLC22A1O15245 554 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 TMPRSS2O15393 492 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 SRMP19623 302 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 FSTP19883 344 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 MYL9P24844 172 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 FGF12P61328 243 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 LSM3P62310 102 aaKnown RBP14.61□□□□□ -0.07
PTPN7-209ENST00000477554 STUMQ69YW2 141 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 NLRC3Q7RTR2 1065 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 NPRL2Q8WTW4 380 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 TMEM158Q8WZ71 300 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 ADAT3Q96EY9 351 aaPredicted RBP14.61□□□□□ -0.07
PTPN7-209ENST00000477554 DUX5Q96PT3 197 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 TCF7L1Q9HCS4 588 aa14.61□□□□□ -0.07
PTPN7-209ENST00000477554 TRAV1-2A0A0B4J238 106 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 PIN1P1O15428 100 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 NRASP01111 189 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 CFHR2P36980 270 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 VBP1P61758 197 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 PPP3R1P63098 170 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 MZT1Q08AG7 82 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 IKZF1Q13422 519 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 CLVS2Q5SYC1 327 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 FAM27D1Q5T7N8 215 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 HAGHLQ6PII5 290 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-209ENST00000477554 UTS2BQ765I0 119 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 RNF144BQ7Z419 303 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 TRMT10AQ8TBZ6 339 aaKnown RBP14.6□□□□□ -0.07
PTPN7-209ENST00000477554 ST8SIA4Q92187 359 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 AQP3Q92482 292 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 TAF15Q92804 592 aaKnown RBP eCLIP14.6□□□□□ -0.07
PTPN7-209ENST00000477554 CHST5Q9GZS9 411 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 ZCCHC4Q9H5U6 513 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 ELL3Q9HB65 397 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-209ENST00000477554 TENM1Q9UKZ4 2725 aa14.6□□□□□ -0.07
PTPN7-209ENST00000477554 IGKV1-27A0A075B6S5 117 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 TRAV40A0A0B4J280 105 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 TMEM210A6NLX4 147 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 MTNR1BP49286 362 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 CEBPDP49716 269 aaPredicted RBP14.59□□□□□ -0.07
PTPN7-209ENST00000477554 UBE2V2Q15819 145 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 MICBQ29980 383 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 TUSC1Q2TAM9 212 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 RUSC1-AS1Q66K80 236 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 BRD3OSQ6XYD6 125 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 USP43Q70EL4 1123 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 BTN2A1Q7KYR7 527 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 TPRA1Q86W33 373 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 ANGPTL5Q86XS5 388 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 CALHM1Q8IU99 346 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 SIGLECL1Q8N7X8 197 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 ZDHHC22Q8N966 263 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 C12orf43Q96C57 262 aaKnown RBP14.59□□□□□ -0.07
PTPN7-209ENST00000477554 C1orf147Q96MC9 270 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms