RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 TMEM100Q9NV29 134 aa3.43□□□□□ -1.86
SMC5-203ENST00000475540 ORC6Q9Y5N6 252 aa3.43□□□□□ -1.86
SMC5-203ENST00000475540 ZNF608Q9ULD9 1512 aaPredicted RBP3.43□□□□□ -1.86
SMC5-203ENST00000475540 IGKV1-8A0A0C4DH67 115 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 TMEM210A6NLX4 147 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 TAAR5O14804 337 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 PSPHP1O15172 72 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 SLC16A4O15374 487 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 ATP8B1O43520 1251 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 CYTH3O43739 400 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 HPGDSO60760 199 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 TRBV12-3P01733 135 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 APOEP02649 317 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 PAX6P26367 422 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 PSMB9P28065 219 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 HOXA6P31267 233 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 TTPAP49638 278 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 PSMB2P49721 201 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 GNA13Q14344 377 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 UAP1Q16222 522 aaPredicted RBP3.42□□□□□ -1.86
SMC5-203ENST00000475540 PRSS8Q16651 343 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 FAM45BPQ6NSW5 357 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 DRAM2Q6UX65 266 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 Q6ZR03 302 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 TMEM156Q8N614 296 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 OR5T1Q8NG75 326 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 OR5L1Q8NGL2 311 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 OR6N1Q8NGY5 312 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 SYNPRQ8TBG9 265 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 ACTL9Q8TC94 416 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 PIFOQ8TCI5 191 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 RXFP4Q8TDU9 374 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 PPP1R14BQ96C90 147 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 MRAP2Q96G30 205 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 METTL26Q96S19 204 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 PITX2Q99697 317 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 SLC40A1Q9NP59 571 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 COMMD9Q9P000 198 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 SIGLEC7Q9Y286 467 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 ADAMTSL3P82987 1691 aa3.42□□□□□ -1.86
SMC5-203ENST00000475540 FGF16O43320 207 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 SERPINA6P08185 405 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 COX5BP10606 129 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 F8A1P23610 371 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 SSTR5P35346 364 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 COILP38432 576 aaPredicted RBP3.41□□□□□ -1.86
SMC5-203ENST00000475540 TGM4P49221 684 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 CEBPGP53567 150 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 DLX6P56179 175 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 BAXQ07812 192 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 LAMTOR4Q0VGL1 99 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 IRF4Q15306 451 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 BCL2A1Q16548 175 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 COX19Q49B96 90 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 SAPCD1Q5SSQ6 148 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 TMEM236Q5W0B7 351 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 MED27Q6P2C8 311 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 SLC25A34Q6PIV7 304 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 ABHD3Q8WU67 409 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 BLNKQ8WV28 456 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 DDIT4LQ96D03 193 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 YIPF6Q96EC8 236 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 TIMM17AQ99595 171 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 HSD17B10Q99714 261 aaKnown RBP3.41□□□□□ -1.86
SMC5-203ENST00000475540 DHX35Q9H5Z1 703 aaKnown RBP3.41□□□□□ -1.86
SMC5-203ENST00000475540 RHOFQ9HBH0 211 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 RBM22Q9NW64 420 aaKnown RBP eCLIP3.41□□□□□ -1.867e-12■■■■■ 63.3
SMC5-203ENST00000475540 EMC3Q9P0I2 261 aa3.41□□□□□ -1.86
SMC5-203ENST00000475540 POLR3HQ9Y535 204 aaPredicted RBP3.41□□□□□ -1.86
SMC5-203ENST00000475540 RAB3GAP2Q9H2M9 1393 aa3.4□□□□□ -1.86
SMC5-203ENST00000475540 TRAV19A0A0A6YYK7 116 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 GOLGA6L19H0YKK7 550 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 MANBAO00462 879 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 NDUFS5O43920 106 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 NPHP4O75161 1426 aaPredicted RBP3.4□□□□□ -1.87
SMC5-203ENST00000475540 ATP5HO75947 161 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 ATP6V1G2O95670 118 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 IGKV1D-16P01601 117 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 RLN2P04090 185 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 TLX1NBP0CAT3 122 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 MUC1P15941 1255 aaPredicted RBP3.4□□□□□ -1.87
SMC5-203ENST00000475540 ACTR1BP42025 376 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 RPL23P62829 140 aaKnown RBP3.4□□□□□ -1.87
SMC5-203ENST00000475540 ERCC8Q13216 396 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 CEACAM16Q2WEN9 425 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 PDZD11Q5EBL8 140 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 HMGN2P46Q86SG4 172 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 DCAKDQ8WVC6 231 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 ANKRD7Q92527 254 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 HGDQ93099 445 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 TMEM159Q96B96 161 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 MRPL48Q96GC5 212 aaKnown RBP3.4□□□□□ -1.87
SMC5-203ENST00000475540 TMEM56Q96MV1 263 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 ZNF2Q9BSG1 426 aaPredicted RBP3.4□□□□□ -1.87
SMC5-203ENST00000475540 TMEM243Q9BU79 118 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 PARD6GQ9BYG4 376 aaPredicted RBP3.4□□□□□ -1.87
SMC5-203ENST00000475540 NOX3Q9HBY0 568 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 RBFOX1Q9NWB1 397 aaKnown RBP3.4□□□□□ -1.87
SMC5-203ENST00000475540 PIKFYVEQ9Y2I7 2098 aa3.4□□□□□ -1.87
SMC5-203ENST00000475540 DNASE2O00115 360 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms