RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 ACSM3Q53FZ2 586 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 FAM76BQ5HYJ3 339 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 DMRTC1Q5HYR2 192 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 BTN2A1Q7KYR7 527 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 C3orf56Q8N813 242 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 ZDHHC22Q8N966 263 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 OR13C9Q8NGT0 318 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 NPRL2Q8WTW4 380 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 RPL3LQ92901 407 aaKnown RBP15.45■□□□□ 0.06
CCDC171-206ENST00000474193 ZDHHC16Q969W1 377 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 SLC25A28Q96A46 364 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 DACT3Q96B18 629 aaPredicted RBP15.45■□□□□ 0.06
CCDC171-206ENST00000474193 SPSB1Q96BD6 273 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 CPNE2Q96FN4 548 aaPredicted RBP15.45■□□□□ 0.06
CCDC171-206ENST00000474193 OR14A2Q96R54 314 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 CCL13Q99616 98 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 DNTTIP1Q9H147 329 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 CTSZQ9UBR2 303 aa15.45■□□□□ 0.06
CCDC171-206ENST00000474193 IGHV3OR16-10A0A075B7F0 116 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 TMEM89A2RUT3 159 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 MAGEA13PA6NCF6 341 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 C22orf46C9J442 243 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 SULT1B1O43704 296 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 INMTO95050 263 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 HCKP08631 526 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 IGHV4-38-2P0DP08 117 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 EGR1P18146 543 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 GLRA1P23415 457 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 PRTN3P24158 256 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 GABRA5P31644 462 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 RBP2P50120 134 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 RPS11P62280 158 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCDC171-206ENST00000474193 HOXA4Q00056 320 aaPredicted RBP15.44■□□□□ 0.06
CCDC171-206ENST00000474193 PDCD1Q15116 288 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 LHFPL2Q6ZUX7 228 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 C9orf139Q6ZV77 190 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 CEACAM19Q7Z692 300 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 CMTM4Q8IZR5 234 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 BCL6BQ8N143 479 aaPredicted RBP15.44■□□□□ 0.06
CCDC171-206ENST00000474193 DNAAF1Q8NEP3 725 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 DMRTB1Q96MA1 342 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 CNTD2Q9H8S5 307 aa15.44■□□□□ 0.06
CCDC171-206ENST00000474193 PQLC2LA1A4F0 135 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 ALX3O95076 343 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 PLATP00750 562 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 AZGP1P25311 298 aaKnown RBP15.43■□□□□ 0.06
CCDC171-206ENST00000474193 TGFBR2P37173 567 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 HAAOP46952 286 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 MTCP1P56278 107 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 RPS25P62851 125 aaKnown RBP15.43■□□□□ 0.06
CCDC171-206ENST00000474193 ATPAF1Q5TC12 328 aaPredicted RBP15.43■□□□□ 0.06
CCDC171-206ENST00000474193 TMIGD2Q96BF3 282 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 WDFY2Q96P53 400 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 DERL3Q96Q80 235 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 OR51I2Q9H344 312 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 NDUFB11Q9NX14 153 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 TAS2R4Q9NYW5 299 aa15.43■□□□□ 0.06
CCDC171-206ENST00000474193 A0A1W2PPK0 400 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 AKR7A2O43488 359 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 CYB5AP00167 134 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 ARF6P62330 175 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 FOXL1Q12952 345 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 SYT6Q5T7P8 510 aaPredicted RBP15.42■□□□□ 0.06
CCDC171-206ENST00000474193 HAGHLQ6PII5 290 aaPredicted RBP15.42■□□□□ 0.06
CCDC171-206ENST00000474193 OR5T2Q8NGG2 359 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 PHYHIPQ92561 330 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 SLITRK2Q9H156 845 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 SMURF1Q9HCE7 757 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 TCF7L1Q9HCS4 588 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 NOX4Q9NPH5 578 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 ESM1Q9NQ30 184 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 SNTG1Q9NSN8 517 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 RPUSD1Q9UJJ7 312 aaKnown RBP15.42■□□□□ 0.06
CCDC171-206ENST00000474193 POLDIP2Q9Y2S7 368 aa15.42■□□□□ 0.06
CCDC171-206ENST00000474193 TRBV5-7A0A0A0MS05 114 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 ARL6IP5O75915 188 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 GABRA2P47869 451 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 COMPP49747 757 aaPredicted RBP15.41■□□□□ 0.06
CCDC171-206ENST00000474193 IL13RA1P78552 427 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 IKZF1Q13422 519 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 HSD17B12Q53GQ0 312 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 SATL1Q86VE3 508 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 H1FXQ92522 213 aaKnown RBP15.41■□□□□ 0.06
CCDC171-206ENST00000474193 MUL1Q969V5 352 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 GPER1Q99527 375 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 MRPS26Q9BYN8 205 aaKnown RBP15.41■□□□□ 0.06
CCDC171-206ENST00000474193 FGF23Q9GZV9 251 aaPredicted RBP15.41■□□□□ 0.06
CCDC171-206ENST00000474193 TMEM138Q9NPI0 162 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 RASL12Q9NYN1 266 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 NLKQ9UBE8 527 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 FOXJ3Q9UPW0 622 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 KPTNQ9Y664 436 aa15.41■□□□□ 0.06
CCDC171-206ENST00000474193 IGKV1-9A0A0C4DH69 117 aa15.4■□□□□ 0.06
CCDC171-206ENST00000474193 DNAJC9-AS1A6NH13 148 aa15.4■□□□□ 0.06
CCDC171-206ENST00000474193 J3QT63 122 aa15.4■□□□□ 0.06
CCDC171-206ENST00000474193 FSTP19883 344 aa15.4■□□□□ 0.06
CCDC171-206ENST00000474193 BDKRB2P30411 391 aa15.4■□□□□ 0.06
CCDC171-206ENST00000474193 SSX1Q16384 188 aa15.4■□□□□ 0.06
CCDC171-206ENST00000474193 UNQ9370/PRO34162Q6UXP9 181 aa15.4■□□□□ 0.06
CCDC171-206ENST00000474193 BRD3OSQ6XYD6 125 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms