RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 LGALS4P56470 323 aa12.4□□□□□ -0.42
VTI1A-203ENST00000472892 LY6EQ16553 131 aa12.4□□□□□ -0.42
VTI1A-203ENST00000472892 RDH10Q8IZV5 341 aa12.4□□□□□ -0.42
VTI1A-203ENST00000472892 UBE2FQ969M7 185 aa12.4□□□□□ -0.42
VTI1A-203ENST00000472892 RAB18Q9NP72 206 aa12.4□□□□□ -0.42
VTI1A-203ENST00000472892 SAC3D1A6NKF1 404 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 VGLL3A8MV65 326 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 TSPAN15O95858 294 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 RBP4P02753 201 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 UBCP0CG48 685 aaKnown RBP12.39□□□□□ -0.43
VTI1A-203ENST00000472892 ZNF728P0DKX0 622 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 PIPP12273 146 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-203ENST00000472892 KIR3DL2P43630 455 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 EFNB2P52799 333 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 CDC42P60953 191 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 TP53I3Q53FA7 332 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 SLC25A30Q5SVS4 291 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 C11orf88Q6PI97 169 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 LIAT1Q6ZQX7 453 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 SLC25A26Q70HW3 274 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 KCTD20Q7Z5Y7 419 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 EGFL6Q8IUX8 553 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 ASCC1Q8N9N2 400 aaKnown RBP12.39□□□□□ -0.43
VTI1A-203ENST00000472892 DNAAF1Q8NEP3 725 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 PP6455Q8WZ26 134 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 SLAMF9Q96A28 289 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 BORCS8Q96FH0 119 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 SNX22Q96L94 193 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 RANBP3Q9H6Z4 567 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-203ENST00000472892 GNG8Q9UK08 70 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 SIGLEC9Q9Y336 463 aa12.39□□□□□ -0.43
VTI1A-203ENST00000472892 LOC107986453A0A1B0GWG9 222 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 TMEM82A0PJX8 343 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 E9PQ18 207 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 J3QRE1 110 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 CIB2O75838 187 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 ISG15P05161 165 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 RBP2P50120 134 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 MEF2CQ06413 473 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-203ENST00000472892 HERPUD1Q15011 391 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 CNN3Q15417 329 aaKnown RBP12.38□□□□□ -0.43
VTI1A-203ENST00000472892 C2orf68Q2NKX9 166 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 TMEM244Q5VVB8 128 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 FDX2Q6P4F2 183 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 ZNF782Q6ZMW2 699 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-203ENST00000472892 GDPD3Q7L5L3 318 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 FAM220AQ7Z4H9 259 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 LHFPL4Q7Z7J7 247 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 Q8IYB0 196 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 OR8H2Q8N162 312 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 DYNAPQ8N1N2 210 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 OR11H6Q8NGC7 330 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 OR4C13Q8NGP0 309 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 OR13D1Q8NGV5 346 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 OR2G2Q8NGZ5 317 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 MALSU1Q96EH3 234 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 ADAT3Q96EY9 351 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-203ENST00000472892 HRASLS5Q96KN8 279 aa12.38□□□□□ -0.43
VTI1A-203ENST00000472892 TBL2Q9Y4P3 447 aaKnown RBP12.38□□□□□ -0.43
VTI1A-203ENST00000472892 NOTCH1P46531 2555 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 IGKV1-9A0A0C4DH69 117 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 ODF3BA8MYP8 253 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 CHST1O43916 411 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 ENTPD6O75354 484 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 INMTO95050 263 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 ALPLP05186 524 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 IGHV1-8P0DP01 117 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 ATP1B3P54709 279 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 EDDM3BP56851 147 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 SNRPGP62308 76 aaKnown RBP12.37□□□□□ -0.43
VTI1A-203ENST00000472892 LDLRAD2Q5SZI1 272 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 Q6ZTK2 550 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 UTS2BQ765I0 119 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 ENTHD1Q8IYW4 607 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 DTX3Q8N9I9 347 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 OR52N4Q8NGI2 321 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 OR2T6Q8NHC8 308 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 CFHR4Q92496 578 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 CDCA4Q9BXL8 241 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 NPFFR1Q9GZQ6 430 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 FRRS1LQ9P0K9 344 aa12.37□□□□□ -0.43
VTI1A-203ENST00000472892 hADV38S2A0JD32 116 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 HAND1O96004 215 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 ARG1P05089 322 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 CSF1P09603 554 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 ATF1P18846 271 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 NPBWR2P48146 333 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 RAB13P51153 203 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 MTCP1P56278 107 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 OR12D2P58182 307 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 NANOS3P60323 173 aaKnown RBP12.36□□□□□ -0.43
VTI1A-203ENST00000472892 ACTC1P68032 377 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 ACTA1P68133 377 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 ZNF146Q15072 292 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 MEDAGQ5VYS4 303 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 ZNF626Q68DY1 528 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 TCF23Q7RTU1 214 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 FAM58AQ8N1B3 248 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 FAM110DQ8TAY7 271 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-203ENST00000472892 PYDC1Q8WXC3 89 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms