RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ISYNA1Q9NPH2 558 aa5.41□□□□□ -1.54
HDAC1-204ENST00000471488 CMTM6Q9NX76 183 aa5.41□□□□□ -1.54
HDAC1-204ENST00000471488 NDUFAF4Q9P032 175 aa5.41□□□□□ -1.54
HDAC1-204ENST00000471488 HUWE1Q7Z6Z7 4374 aaKnown RBP5.41□□□□□ -1.54
HDAC1-204ENST00000471488 STARD9Q9P2P6 4700 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 LINC01548A6NM66 108 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 RIIAD1A6NNX1 92 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 BBIP1A8MTZ0 92 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 LDLRAD4O15165 306 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 SOX14O95416 240 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 LY6G6CO95867 125 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 RBP4P02753 201 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 LYNP07948 512 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 CDK2P24941 298 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 PEX2P28328 305 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 DUSP1P28562 367 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 OPRL1P41146 370 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 SMIM11AP58511 58 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 RIPPLY1Q0D2K3 151 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 KLF10Q13118 480 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 GPR50Q13585 617 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 LTC4SQ16873 150 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 FAM76BQ5HYJ3 339 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 SAMD4BQ5PRF9 694 aaKnown RBP5.4□□□□□ -1.54
HDAC1-204ENST00000471488 TPTE2P1Q5T6R2 138 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 CCDC144NLQ6NUI1 221 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 PRSS45Q7RTY3 260 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 OR8H2Q8N162 312 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 STPG2Q8N412 459 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 COMMD1Q8N668 190 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 RP9Q8TA86 221 aaKnown RBP5.4□□□□□ -1.54
HDAC1-204ENST00000471488 OR51E1Q8TCB6 317 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 RNF133Q8WVZ7 376 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 SLAMF9Q96A28 289 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 RPEQ96AT9 228 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 NRIP2Q9BQI9 281 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 TSSK6Q9BXA6 273 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 ENPP5Q9UJA9 477 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 SIRT4Q9Y6E7 314 aaPredicted RBP5.4□□□□□ -1.54
HDAC1-204ENST00000471488 CDH10Q9Y6N8 788 aa5.4□□□□□ -1.54
HDAC1-204ENST00000471488 TRGV10A0A0A0MS01 117 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 BUB1B-PAK6H3BSN5 160 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 SIRPB1O00241 398 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 SELENOFO60613 162 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 NPPAP01160 153 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 IFNGP01579 166 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 IGKV1D-33P01593 117 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 IGKV1-33P01594 117 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 IGHA1P01876 353 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 IFNA6P05013 189 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 GP9P14770 177 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 ZNF3P17036 446 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 MYF6P23409 242 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 RRM2P31350 389 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 PRRX1P54821 245 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 RPS7P62081 194 aaKnown RBP5.39□□□□□ -1.55
HDAC1-204ENST00000471488 SCN1BQ07699 218 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 TSPAN31Q12999 210 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 KIR2DS1Q14954 304 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 PNLIPRP3Q17RR3 467 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 SLX4IPQ5VYV7 408 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 OR52W1Q6IF63 320 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 SHFQ7M4L6 423 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 TCF23Q7RTU1 214 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 HAPLN4Q86UW8 402 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 EGFL6Q8IUX8 553 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 DRAM1Q8N682 238 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 C5orf56Q8N8D9 126 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 OR9Q2Q8NGE9 314 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 OR4D6Q8NGJ1 314 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 EMG1Q92979 244 aaKnown RBP5.39□□□□□ -1.55
HDAC1-204ENST00000471488 LEAP2Q969E1 77 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 ST6GALNAC6Q969X2 333 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 MCUR1Q96AQ8 359 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 TLCD1Q96CP7 247 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 RSRP1Q9BUV0 290 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 GAL3ST2Q9H3Q3 398 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 ZNF286AQ9HBT8 521 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 TMBIM4Q9HC24 238 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 GPR84Q9NQS5 396 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 ARMC1Q9NVT9 282 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 GLS2Q9UI32 602 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.39□□□□□ -1.55
HDAC1-204ENST00000471488 LINC00312Q9Y6C7 94 aa5.39□□□□□ -1.55
HDAC1-204ENST00000471488 IGHV3-72A0A0B4J1Y9 119 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 TMEM269A0A1B0GVZ9 245 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 TMEM82A0PJX8 343 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 AP4M1O00189 453 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 NME4O00746 187 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 HAND1O96004 215 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 IGHV4-30-4P0DP06 118 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 VDAC1P21796 283 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 GNG10P50151 68 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 BLVRAP53004 296 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 HCCSP53701 268 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 PSMA6P60900 246 aaKnown RBP5.38□□□□□ -1.55
HDAC1-204ENST00000471488 BDH1Q02338 343 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 MEF2CQ06413 473 aaPredicted RBP5.38□□□□□ -1.55
HDAC1-204ENST00000471488 BNIP1Q12981 228 aa5.38□□□□□ -1.55
HDAC1-204ENST00000471488 ODF4Q2M2E3 257 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms