RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 VAMP5O95183 116 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF865P0CJ78 1059 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 HIST1H1BP16401 226 aaKnown RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 OR10J1P30954 320 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 CCR2P41597 374 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 CSNK1DP48730 415 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 TNFAIP6P98066 277 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 CLLU1OSQ5K130 101 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 UQCC3Q6UW78 93 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 OR4C3Q8NH37 302 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 SPPL3Q8TCT6 385 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 ORAI1Q96D31 301 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 MEGF10Q96KG7 1140 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 CES1P1Q9UKY3 287 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 BAZ2BQ9UIF8 2168 aaKnown RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 NPIPB6E9PJ23 425 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 SRSF10O75494 262 aaKnown RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 TSPAN12O95859 305 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 DCTDP32321 178 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 ERVFRD-1P60508 538 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 MRPL58Q14197 206 aaKnown RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 KCNMB1Q16558 191 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM128Q5BJH2 165 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 ACSM5Q6NUN0 579 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 GBGT1Q8N5D6 347 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 MS4A8Q9BY19 250 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 DUSP21Q9H596 190 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 PARP11Q9NR21 331 aa6.18□□□□□ -1.42
BRCA1-210ENST00000471181 ERRFI1Q9UJM3 462 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-210ENST00000471181 CDX4O14627 284 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 RPS4Y1P22090 263 aaKnown RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 CA6P23280 308 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 FKBP2P26885 142 aaKnown RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 IER3P46695 156 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 GSG1Q2KHT4 349 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF740Q8NDX6 193 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 PHOSPHO2Q8TCD6 241 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 FAM222BQ8WU58 562 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 LRRC29Q8WV35 223 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 PERPQ96FX8 193 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 CYB5R1Q9UHQ9 305 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 F11RQ9Y624 299 aaKnown RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 COL5A3P25940 1745 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 NID2Q14112 1375 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 CD1EP15812 388 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 AVPR2P30518 371 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 HINT1P49773 126 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 LOXL3P58215 753 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 RPL18Q07020 188 aaKnown RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 CIRBPQ14011 172 aaKnown RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 DUSP5Q16690 384 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 EBLN2Q6P2I7 272 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 SLC16A11Q8NCK7 471 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 OR11G2Q8NGC1 345 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 OR8B3Q8NGG8 313 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 OR13G1Q8NGZ3 307 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 BAHD1Q8TBE0 780 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 OR8B2Q96RD0 313 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 TMUB1Q9BVT8 246 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 CHRNA10Q9GZZ6 450 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 RAB1BQ9H0U4 201 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 LPAR2Q9HBW0 351 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 CACNG5Q9UF02 275 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 QSER1Q2KHR3 1735 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 C3orf85A0A1B0GTC6 90 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 CGB1A6NKQ9 187 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 STAG3L3P0CL85 134 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 EGR3Q06889 387 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 STAC2Q6ZMT1 411 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 OR10G8Q8NGN5 311 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 MRGPRDQ8TDS7 321 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 GATA6Q92908 595 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 NEURL3Q96EH8 262 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 FUT9Q9Y231 359 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 GFYI3L273 518 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 RBFOX2O43251 390 aaKnown RBP eCLIP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 GABRA1P14867 456 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 ZP3P21754 424 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 BRS3P32247 399 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 MAS1LP35410 378 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 RBM11P57052 281 aaKnown RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 ELAVL1Q15717 326 aaKnown RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 C10orf113Q5VZT2 155 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 C11orf87Q6NUJ2 197 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 PAQR6Q6TCH4 344 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 RNF165Q6ZSG1 346 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 HTR3DQ70Z44 454 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 FAM169BQ8N8A8 192 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 Q8WTZ3 238 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 COPS9Q8WXC6 57 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 EID2BQ96D98 161 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 METTL26Q96S19 204 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 SLC46A2Q9BY10 475 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 SLC26A1Q9H2B4 701 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 LRP6O75581 1613 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 PRSS37A4D1T9 235 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 KLK10O43240 276 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 FUCA1P04066 466 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 IL4P05112 153 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms