RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 EDDM3BP56851 147 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 UBE2V2Q15819 145 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 ODF4Q2M2E3 257 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 ZNF626Q68DY1 528 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 OR8H2Q8N162 312 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 OR11H6Q8NGC7 330 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 RPS4Y2Q8TD47 263 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 TBX5Q99593 518 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 NKX3-1Q99801 234 aaPredicted RBP14.14□□□□□ -0.15
COL7A1-208ENST00000470076 ADI1Q9BV57 179 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 CADM1Q9BY67 442 aaKnown RBP14.14□□□□□ -0.15
COL7A1-208ENST00000470076 CHST5Q9GZS9 411 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 ABCB10Q9NRK6 738 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 MTCH1Q9NZJ7 389 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 PITPNC1Q9UKF7 332 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 A0A1W2PQL4 384 aaPredicted RBP14.13□□□□□ -0.15
COL7A1-208ENST00000470076 METTL15A6NJ78 407 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 SERPINA3P01011 423 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 IGHV1-8P0DP01 117 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 FASP25445 335 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 HTR1FP30939 366 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 MEF2CQ06413 473 aaPredicted RBP14.13□□□□□ -0.15
COL7A1-208ENST00000470076 FAM189A2Q15884 450 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 PLA1AQ53H76 456 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 DYNAPQ8N1N2 210 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 Q8N2B8 174 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 C10orf35Q96D05 121 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 SNX22Q96L94 193 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 ZNF702PQ9H963 129 aa14.13□□□□□ -0.15
COL7A1-208ENST00000470076 SEBOXQ9HB31 216 aaPredicted RBP14.13□□□□□ -0.15
COL7A1-208ENST00000470076 IGKV1-27A0A075B6S5 117 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 F8VVB4 439 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 F8VWA3 439 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 G3V4G9 280 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 RAB13P51153 203 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 CNN3Q15417 329 aaKnown RBP14.12□□□□□ -0.15
COL7A1-208ENST00000470076 SSX2Q16385 188 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 BEAN1Q3B7T3 259 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 SLC25A26Q70HW3 274 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 EGFL6Q8IUX8 553 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 Q8IYB0 196 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 SLAMF9Q96A28 289 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 BORCS8Q96FH0 119 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 ZNF714Q96N38 554 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 SERTAD4Q9NUC0 356 aa14.12□□□□□ -0.15
COL7A1-208ENST00000470076 hADV38S2A0JD32 116 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 A6NDX4 124 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 H3BSH0 61 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 FBXO24O75426 580 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 UBCP0CG48 685 aaKnown RBP14.11□□□□□ -0.15
COL7A1-208ENST00000470076 FCGR1AP12314 374 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 ATP6V1E1P36543 226 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 DYNLT3P51808 116 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 OR12D2P58182 307 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 DYNC1I2Q13409 638 aaKnown RBP14.11□□□□□ -0.15
COL7A1-208ENST00000470076 TMED1Q13445 227 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 KPRPQ5T749 579 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-208ENST00000470076 SAMD5Q5TGI4 173 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 HIST2H2BDQ6DRA6 164 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 CCBE1Q6UXH8 406 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-208ENST00000470076 ENTHD1Q8IYW4 607 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 OR10H4Q8NGA5 316 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 OR8J1Q8NGP2 316 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 PP6455Q8WZ26 134 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 EMG1Q92979 244 aaKnown RBP14.11□□□□□ -0.15
COL7A1-208ENST00000470076 CIB1Q99828 191 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 PRSS22Q9GZN4 317 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 AP4S1Q9Y587 144 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 LINC00312Q9Y6C7 94 aa14.11□□□□□ -0.15
COL7A1-208ENST00000470076 LOC107986453A0A1B0GWG9 222 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 TMEM82A0PJX8 343 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 MEX3AA1L020 520 aaKnown RBP14.1□□□□□ -0.15
COL7A1-208ENST00000470076 APOL3O95236 402 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 HAND1O96004 215 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 PEX2P28328 305 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 ACTA2P62736 377 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 ACTG2P63267 376 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 ACTC1P68032 377 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 ACTA1P68133 377 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 EMX1Q04741 257 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-208ENST00000470076 EDDM3AQ14507 147 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 HABP2Q14520 560 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-208ENST00000470076 LDLRAD2Q5SZI1 272 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 MINOS1Q5TGZ0 78 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 TCF23Q7RTU1 214 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 FAM220AQ7Z4H9 259 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 TMEM219Q86XT9 240 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 PRSS35Q8N3Z0 413 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 DNAAF1Q8NEP3 725 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 RFKQ969G6 155 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 MINOS1-NBL1R4GNA1 71 aa14.1□□□□□ -0.15
COL7A1-208ENST00000470076 INMTO95050 263 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 CYB5AP00167 134 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 POLR2IP36954 125 aaKnown RBP14.09□□□□□ -0.15
COL7A1-208ENST00000470076 RBP2P50120 134 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 RASSF2P50749 326 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 ATP1B3P54709 279 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 ZNF91Q05481 1191 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 BNIP1Q12981 228 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 GRK1Q15835 563 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms