RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 KIR3DL2P43630 455 aa15.31■□□□□ 0.04
SF3A1-205ENST00000463818 DLX6P56179 175 aa15.31■□□□□ 0.04
SF3A1-205ENST00000463818 AANATQ16613 207 aa15.31■□□□□ 0.04
SF3A1-205ENST00000463818 ZNF782Q6ZMW2 699 aaPredicted RBP15.31■□□□□ 0.04
SF3A1-205ENST00000463818 SLC25A26Q70HW3 274 aa15.31■□□□□ 0.04
SF3A1-205ENST00000463818 TRUB1Q8WWH5 349 aaKnown RBP15.31■□□□□ 0.04
SF3A1-205ENST00000463818 RNF166Q96A37 237 aaPredicted RBP15.31■□□□□ 0.04
SF3A1-205ENST00000463818 BORCS8Q96FH0 119 aa15.31■□□□□ 0.04
SF3A1-205ENST00000463818 CHST5Q9GZS9 411 aa15.31■□□□□ 0.04
SF3A1-205ENST00000463818 S100A14Q9HCY8 104 aa15.31■□□□□ 0.04
SF3A1-205ENST00000463818 SIGLEC9Q9Y336 463 aa15.31■□□□□ 0.04
SF3A1-205ENST00000463818 LOC107986453A0A1B0GWG9 222 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 E9PQ18 207 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 ENTPD6O75354 484 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 ZNF737O75373 536 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 ALPLP05186 524 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 ISL1P61371 349 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 PDLIM3Q53GG5 364 aaPredicted RBP15.3■□□□□ 0.04
SF3A1-205ENST00000463818 CRIP3Q6Q6R5 217 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 FAM220AQ7Z4H9 259 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 LHFPL4Q7Z7J7 247 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 PIFOQ8TCI5 191 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 C10orf35Q96D05 121 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 SNX22Q96L94 193 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 IMPAD1Q9NX62 359 aa15.3■□□□□ 0.04
SF3A1-205ENST00000463818 MEX3AA1L020 520 aaKnown RBP15.29■□□□□ 0.04
SF3A1-205ENST00000463818 FAM90A8PA6NJQ4 464 aa15.29■□□□□ 0.04
SF3A1-205ENST00000463818 UBCP0CG48 685 aaKnown RBP15.29■□□□□ 0.04
SF3A1-205ENST00000463818 ZNF728P0DKX0 622 aa15.29■□□□□ 0.04
SF3A1-205ENST00000463818 KIR2DS4P43632 304 aa15.29■□□□□ 0.04
SF3A1-205ENST00000463818 ATP1B3P54709 279 aa15.29■□□□□ 0.04
SF3A1-205ENST00000463818 EDDM3BP56851 147 aa15.29■□□□□ 0.04
SF3A1-205ENST00000463818 ZSCAN26Q16670 478 aa15.29■□□□□ 0.04
SF3A1-205ENST00000463818 GDPD3Q7L5L3 318 aa15.29■□□□□ 0.04
SF3A1-205ENST00000463818 OR2G2Q8NGZ5 317 aa15.29■□□□□ 0.04
SF3A1-205ENST00000463818 PP6455Q8WZ26 134 aa15.29■□□□□ 0.04
SF3A1-205ENST00000463818 ADAT3Q96EY9 351 aaPredicted RBP15.29■□□□□ 0.04
SF3A1-205ENST00000463818 TMEM82A0PJX8 343 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 RBP2P50120 134 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 CNN3Q15417 329 aaKnown RBP15.28■□□□□ 0.04
SF3A1-205ENST00000463818 SLC25A30Q5SVS4 291 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 TMEM244Q5VVB8 128 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 KCTD20Q7Z5Y7 419 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 DYNAPQ8N1N2 210 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 PQLC1Q8N2U9 271 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 DNAAF1Q8NEP3 725 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 FAM110DQ8TAY7 271 aaPredicted RBP15.28■□□□□ 0.04
SF3A1-205ENST00000463818 EMG1Q92979 244 aaKnown RBP15.28■□□□□ 0.04
SF3A1-205ENST00000463818 FGGYQ96C11 551 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 RNFT2Q96EX2 444 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 HRASLS5Q96KN8 279 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 SEBOXQ9HB31 216 aaPredicted RBP15.28■□□□□ 0.04
SF3A1-205ENST00000463818 RAB18Q9NP72 206 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 FRRS1LQ9P0K9 344 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 ORC6Q9Y5N6 252 aa15.28■□□□□ 0.04
SF3A1-205ENST00000463818 IGKV1-9A0A0C4DH69 117 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 DAPL1A0PJW8 107 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 J3QRE1 110 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 TSPAN15O95858 294 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 ARG1P05089 322 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 ATF1P18846 271 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 NPBWR2P48146 333 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 EFNB2P52799 333 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 MTCP1P56278 107 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 OR12D2P58182 307 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 SNRPGP62308 76 aaKnown RBP15.27■□□□□ 0.04
SF3A1-205ENST00000463818 ZIK1Q3SY52 487 aaPredicted RBP15.27■□□□□ 0.04
SF3A1-205ENST00000463818 OR8H2Q8N162 312 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 OR4C13Q8NGP0 309 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 OR13D1Q8NGV5 346 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 IL36RNQ9UBH0 155 aa15.27■□□□□ 0.04
SF3A1-205ENST00000463818 EI24O14681 340 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 SLC16A6O15403 523 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 HAND1O96004 215 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 PRKACBP22694 351 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 DUSP1P28562 367 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 POU3F4P49335 361 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 RAB13P51153 203 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 ALDH3A2P51648 485 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 NANOS3P60323 173 aaKnown RBP15.26■□□□□ 0.03
SF3A1-205ENST00000463818 MEF2CQ06413 473 aaPredicted RBP15.26■□□□□ 0.03
SF3A1-205ENST00000463818 EDDM3AQ14507 147 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 HERPUD1Q15011 391 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 PLA1AQ53H76 456 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 MEDAGQ5VYS4 303 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 FDX2Q6P4F2 183 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 UTS2BQ765I0 119 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 Q8IYB0 196 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 ENTHD1Q8IYW4 607 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 FAM58AQ8N1B3 248 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 OR52N4Q8NGI2 321 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 MALSU1Q96EH3 234 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 RBFOX1Q9NWB1 397 aaKnown RBP15.26■□□□□ 0.03
SF3A1-205ENST00000463818 TBL2Q9Y4P3 447 aaKnown RBP15.26■□□□□ 0.03
SF3A1-205ENST00000463818 VWFP04275 2813 aa15.26■□□□□ 0.03
SF3A1-205ENST00000463818 hADV38S2A0JD32 116 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 MEGF11A6BM72 1044 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 VGLL3A8MV65 326 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 ODF3BA8MYP8 253 aa15.25■□□□□ 0.03
SF3A1-205ENST00000463818 CHST1O43916 411 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms