RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 CKLFQ9UBR5 152 aa11.65□□□□□ -0.54
HDLBP-229ENST00000460826 METRNQ9UJH8 293 aa11.65□□□□□ -0.54
HDLBP-229ENST00000460826 DSCAML1Q8TD84 2053 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 A0A087WXM4 84 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 RFPL4AA6NLU0 287 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 A8MXK9 166 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 RFPL4AL1F8VTS6 287 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 TRAPPC2LH3BP13 241 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 CCRL2O00421 344 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 MAGEB3O15480 346 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 KDM4BO94953 1096 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 SFTPBP07988 381 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 TMEM225BP0DP42 221 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 ZNF93P35789 620 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-229ENST00000460826 GABRA2P47869 451 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 TRAM1Q15629 374 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 SMIM21Q3B7S5 101 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 ESCO2Q56NI9 601 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 SYT6Q5T7P8 510 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-229ENST00000460826 WDR25Q64LD2 544 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-229ENST00000460826 LRRTM1Q86UE6 522 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 LYPD6Q86Y78 171 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 CD177Q8N6Q3 437 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 TNFAIP8L1Q8WVP5 186 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 MUL1Q969V5 352 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 SSBP3Q9BWW4 388 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-229ENST00000460826 OR14J1Q9UGF5 321 aa11.64□□□□□ -0.55
HDLBP-229ENST00000460826 TRIM64CA6NLI5 447 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 DVL1O14640 695 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 TMPRSS2O15393 492 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 FOXH1O75593 365 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 CYB5AP00167 134 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 SMIM18P0DKX4 95 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 PSMA1P25786 263 aaKnown RBP11.63□□□□□ -0.55
HDLBP-229ENST00000460826 DVL1P1P54792 670 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-229ENST00000460826 SNU13P55769 128 aaKnown RBP11.63□□□□□ -0.55
HDLBP-229ENST00000460826 GNB2P62879 340 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 IKZF1Q13422 519 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 DGUOKQ16854 277 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 HSD17B12Q53GQ0 312 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 FAM166AQ6J272 317 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 CD200R1LQ6Q8B3 271 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 NLRC3Q7RTR2 1065 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 GLCCI1Q86VQ1 547 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 SAXO1Q8IYX7 474 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 FAM58AQ8N1B3 248 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 ZSCAN4Q8NAM6 433 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-229ENST00000460826 EMG1Q92979 244 aaKnown RBP11.63□□□□□ -0.55
HDLBP-229ENST00000460826 TMEM186Q96B77 213 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 MMP26Q9NRE1 261 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 HIF1ANQ9NWT6 349 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 CLN8Q9UBY8 286 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 MAB21L2Q9Y586 359 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 MXRA5Q9NR99 2828 aa11.63□□□□□ -0.55
HDLBP-229ENST00000460826 ZFHX3Q15911 3703 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 NKX6-3A6NJ46 265 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 A8MV72 311 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-229ENST00000460826 C22orf46C9J442 243 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 INAFM1C9JVW0 142 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 SIGLEC5O15389 551 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 CDRT1O95170 752 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 KNG1P01042 644 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 PRKACAP17612 351 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 SRMP19623 302 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 CPT2P23786 658 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 DUSP1P28562 367 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 PRDX2P32119 198 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 PTGFRP43088 359 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 PAX2Q02962 417 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 ASCL4Q6XD76 172 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 SLC36A1Q7Z2H8 476 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 Q8IYB0 196 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 JAGN1Q8N5M9 183 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 ZNRF1Q8ND25 227 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 PXT1Q8NFP0 134 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 OR10K1Q8NGX5 313 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 PHYHIPQ92561 330 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 SDSLQ96GA7 329 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 NR1H4Q96RI1 486 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-229ENST00000460826 GFI1Q99684 422 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 FAM192AQ9GZU8 254 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 DNTTIP1Q9H147 329 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 TCF7L1Q9HCS4 588 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 HMG20AQ9NP66 347 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 KCNS2Q9ULS6 477 aa11.62□□□□□ -0.55
HDLBP-229ENST00000460826 POLR3KQ9Y2Y1 108 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-229ENST00000460826 NF1P21359 2839 aa11.61□□□□□ -0.55
HDLBP-229ENST00000460826 NAV3Q8IVL0 2385 aa11.61□□□□□ -0.55
HDLBP-229ENST00000460826 TRAV20A0A0B4J274 112 aa11.61□□□□□ -0.55
HDLBP-229ENST00000460826 TRDV1A0A1B0GX56 115 aa11.61□□□□□ -0.55
HDLBP-229ENST00000460826 SHISA3A0PJX4 238 aa11.61□□□□□ -0.55
HDLBP-229ENST00000460826 CALRP27797 417 aaKnown RBP11.61□□□□□ -0.55
HDLBP-229ENST00000460826 IL13RA1P78552 427 aa11.61□□□□□ -0.55
HDLBP-229ENST00000460826 KIAA2026Q5HYC2 2103 aa11.61□□□□□ -0.55
HDLBP-229ENST00000460826 OR4D6Q8NGJ1 314 aa11.61□□□□□ -0.55
HDLBP-229ENST00000460826 ST8SIA4Q92187 359 aa11.61□□□□□ -0.55
HDLBP-229ENST00000460826 DACT3Q96B18 629 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-229ENST00000460826 CPNE2Q96FN4 548 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-229ENST00000460826 CNTD2Q9H8S5 307 aa11.61□□□□□ -0.55
HDLBP-229ENST00000460826 ELL3Q9HB65 397 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms