RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 C19orf12Q9NSK7 152 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 ERVK13-1Q9NX77 482 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 OR14J1Q9UGF5 321 aa13.22□□□□□ -0.29
COL7A1-203ENST00000459756 H0YAE9 185 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 NPFFO15130 113 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 ATF1P18846 271 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 CEBPDP49716 269 aaPredicted RBP13.21□□□□□ -0.29
COL7A1-203ENST00000459756 UBE2E1P51965 193 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 ATP1B3P54709 279 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 MTCP1P56278 107 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 RIPK1Q13546 671 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 IZUMO2Q6UXV1 221 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 MKXQ8IYA7 352 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 Q8IYB0 196 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 ZNF676Q8N7Q3 588 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 SETD9Q8NE22 299 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 OR52I1Q8NGK6 324 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 OR13C3Q8NGS6 347 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 HAVCR2Q8TDQ0 301 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 APH1BQ8WW43 257 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 SLAMF9Q96A28 289 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 ZNF747Q9BV97 191 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 CHIAQ9BZP6 476 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 ISG20L2Q9H9L3 353 aaKnown RBP13.21□□□□□ -0.29
COL7A1-203ENST00000459756 TNFRSF19Q9NS68 423 aa13.21□□□□□ -0.29
COL7A1-203ENST00000459756 IGKV1-9A0A0C4DH69 117 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 FAM181BA6NEQ2 426 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 F8VVB4 439 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 F8VWA3 439 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 CYB5AP00167 134 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 TK1P04183 234 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 CRYBA1P05813 215 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 CHRM2P08172 466 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 FBP1P09467 338 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 GNAO1P09471 354 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 AZGP1P25311 298 aaKnown RBP13.2□□□□□ -0.3
COL7A1-203ENST00000459756 IER3P46695 156 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 DLX1P56177 255 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 RPL15P61313 204 aaKnown RBP13.2□□□□□ -0.3
COL7A1-203ENST00000459756 PRB3Q04118 309 aaPredicted RBP13.2□□□□□ -0.3
COL7A1-203ENST00000459756 ACSM1Q08AH1 577 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 KLRD1Q13241 179 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 SMN1Q16637 294 aaKnown RBP13.2□□□□□ -0.3
COL7A1-203ENST00000459756 FIP1L1Q6UN15 594 aaKnown RBP13.2□□□□□ -0.3
COL7A1-203ENST00000459756 LHFPL2Q6ZUX7 228 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 C8orf59Q8N0T1 100 aaPredicted RBP13.2□□□□□ -0.3
COL7A1-203ENST00000459756 OR10AC1Q8NH08 325 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 ZNF649Q9BS31 505 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 DPAGT1Q9H3H5 408 aa13.2□□□□□ -0.3
COL7A1-203ENST00000459756 hCG_1809904A0A1W2PP81 198 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 A0A1W2PPE2 198 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 A0A1W2PR64 198 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 A0A1W2PRV1 198 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 TMEM212A6NML5 194 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 POM121CA8CG34 1229 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 K7N7A8 449 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 WBP4O75554 376 aaKnown RBP13.19□□□□□ -0.3
COL7A1-203ENST00000459756 IGHV4-59P01825 116 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 CCDC159P0C7I6 412 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 OCM2P0CE71 109 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 OCMP0CE72 109 aaPredicted RBP13.19□□□□□ -0.3
COL7A1-203ENST00000459756 GBX2P52951 348 aaPredicted RBP13.19□□□□□ -0.3
COL7A1-203ENST00000459756 COL10A1Q03692 680 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 TMEM200BQ69YZ2 307 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 ASCC1Q8N9N2 400 aaKnown RBP13.19□□□□□ -0.3
COL7A1-203ENST00000459756 OR51A4Q8NGJ6 313 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 DYRK2Q92630 601 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 OPALINQ96PE5 141 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 JAM3Q9BX67 310 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 SEBOXQ9HB31 216 aaPredicted RBP13.19□□□□□ -0.3
COL7A1-203ENST00000459756 NEK6Q9HC98 313 aa13.19□□□□□ -0.3
COL7A1-203ENST00000459756 FGF20Q9NP95 211 aaPredicted RBP13.19□□□□□ -0.3
COL7A1-203ENST00000459756 SF3B6Q9Y3B4 125 aaKnown RBP13.19□□□□□ -0.3
COL7A1-203ENST00000459756 NBEAL1Q6ZS30 2694 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 TRBV2A0A0J9YWF9 115 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 MEIOCA2RUB1 952 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 ZNF737O75373 536 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 INMTO95050 263 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 ZFPL1O95159 310 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 PAHP00439 452 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 MT-ND2P03891 347 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 SAA4P35542 130 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 POU3F4P49335 361 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 PDZK1IP1Q13113 114 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 SHISA2Q6UWI4 295 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 OR4M1Q8NGD0 313 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 OR5AK2Q8NH90 309 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 SGMS2Q8NHU3 365 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 EMG1Q92979 244 aaKnown RBP13.18□□□□□ -0.3
COL7A1-203ENST00000459756 COMMD4Q9H0A8 199 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 ZNRD1Q9P1U0 126 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 MMP24Q9Y5R2 645 aa13.18□□□□□ -0.3
COL7A1-203ENST00000459756 A0A1B0GUS0 222 aa13.17□□□□□ -0.3
COL7A1-203ENST00000459756 A0A1W2PRD5 423 aa13.17□□□□□ -0.3
COL7A1-203ENST00000459756 A0A1W2PRF3 423 aa13.17□□□□□ -0.3
COL7A1-203ENST00000459756 A0A1W2PRM7 423 aa13.17□□□□□ -0.3
COL7A1-203ENST00000459756 IRGMA1A4Y4 181 aa13.17□□□□□ -0.3
COL7A1-203ENST00000459756 BTBD17A6NE02 478 aa13.17□□□□□ -0.3
COL7A1-203ENST00000459756 E9PI62 339 aa13.17□□□□□ -0.3
COL7A1-203ENST00000459756 NDUFA7O95182 113 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms