RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 KCTD20Q7Z5Y7 419 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 RDH10Q8IZV5 341 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 RNFT2Q96EX2 444 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 PPA2Q9H2U2 334 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 C16orf95Q9H693 158 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 DCLRE1BQ9H816 532 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 MTCH1Q9NZJ7 389 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 DAPL1A0PJW8 107 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 TSPAN9O75954 239 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 CYB5AP00167 134 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 OCM2P0CE71 109 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 OCMP0CE72 109 aaPredicted RBP10.5□□□□□ -0.73
CHD3-206ENST00000452447 CCL3L1P16619 93 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 COX7A1P24310 79 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 RBP2P50120 134 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 ALDH3A2P51648 485 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 ATP1B3P54709 279 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 EDDM3BP56851 147 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 PROK1P58294 105 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 ERVFRD-1P60508 538 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 ISL1P61371 349 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 SNRPGP62308 76 aaKnown RBP10.5□□□□□ -0.73
CHD3-206ENST00000452447 ZNF273Q14593 569 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 EGFL6Q8IUX8 553 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 OR2G2Q8NGZ5 317 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 C17orf50Q8WW18 174 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 SLAMF9Q96A28 289 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 TCF7L1Q9HCS4 588 aa10.5□□□□□ -0.73
CHD3-206ENST00000452447 IGKV1-27A0A075B6S5 117 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 F8VVB4 439 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 F8VWA3 439 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 WIPF1O43516 503 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 HTR1AP08908 422 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 ZNF20P17024 532 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 KIR3DL2P43630 455 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 LY6EQ16553 131 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 OCLNQ16625 522 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 LRRC75BQ2VPJ9 315 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 SLC25A30Q5SVS4 291 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 ZNF782Q6ZMW2 699 aaPredicted RBP10.49□□□□□ -0.73
CHD3-206ENST00000452447 Q8IYB0 196 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 C11orf42Q8N5U0 333 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 EMG1Q92979 244 aaKnown RBP10.49□□□□□ -0.73
CHD3-206ENST00000452447 MEGF9Q9H1U4 602 aa10.49□□□□□ -0.73
CHD3-206ENST00000452447 H3BNX3 289 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 SLC16A6O15403 523 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 ISG15P05161 165 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 PRKACBP22694 351 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 GABRA5P31644 462 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 POU3F4P49335 361 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 MTCP1P56278 107 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 OR12D2P58182 307 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 KRTAP10-3P60369 221 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 ACTA2P62736 377 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 ACTG2P63267 376 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 RIPK1Q13546 671 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 AANATQ16613 207 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 SLC35E4Q6ICL7 350 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 ENTHD1Q8IYW4 607 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 OR8H2Q8N162 312 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 CBR4Q8N4T8 237 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 ACBD7Q8N6N7 88 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 DNAAF1Q8NEP3 725 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 ADAT3Q96EY9 351 aaPredicted RBP10.48□□□□□ -0.73
CHD3-206ENST00000452447 MRPL48Q96GC5 212 aaKnown RBP10.48□□□□□ -0.73
CHD3-206ENST00000452447 SNX22Q96L94 193 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 RAB18Q9NP72 206 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 FRRS1LQ9P0K9 344 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 MEX3AA1L020 520 aaKnown RBP10.48□□□□□ -0.73
CHD3-206ENST00000452447 C17orf98A8MV24 154 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 J3QRE1 110 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 ZNF737O75373 536 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 HAND1O96004 215 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 ZNF728P0DKX0 622 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 ATF1P18846 271 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 GABRR1P24046 479 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 BMXP51813 675 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 EDDM3AQ14507 147 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 LHFPL2Q6ZUX7 228 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 UTS2BQ765I0 119 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 FAM58AQ8N1B3 248 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 OR13D1Q8NGV5 346 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 FGGYQ96C11 551 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 AJUBAQ96IF1 538 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 MMP27Q9H306 513 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 S100A14Q9HCY8 104 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 GLS2Q9UI32 602 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 HHLA2Q9UM44 414 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 GMPPBQ9Y5P6 360 aa10.48□□□□□ -0.73
CHD3-206ENST00000452447 TET2Q6N021 2002 aaPredicted RBP10.47□□□□□ -0.73
CHD3-206ENST00000452447 hADV38S2A0JD32 116 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 J3QLW9 94 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 MPZL2O60487 215 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 ARG1P05089 322 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 ZNF19P17023 458 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 AZGP1P25311 298 aaKnown RBP10.47□□□□□ -0.73
CHD3-206ENST00000452447 PAX6P26367 422 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 PEX2P28328 305 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 CCR9P51686 369 aa10.47□□□□□ -0.73
CHD3-206ENST00000452447 NANOS3P60323 173 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms