RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 THBS4P35443 961 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ACAA2P42765 397 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 DEFA5Q01523 94 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF385CQ66K41 422 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 STAC2Q6ZMT1 411 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 LHFPL2Q6ZUX7 228 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 SYT9Q86SS6 491 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF584Q8IVC4 421 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 KLHL30-AS1Q8NEE0 82 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR52M1Q8NGK5 317 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ITLN1Q8WWA0 313 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ST6GALNAC5Q9BVH7 336 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR2H1Q9GZK4 316 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 CNTD2Q9H8S5 307 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 RER1O15258 196 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 RLN2P04090 185 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 PTGFRP43088 359 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 IL18Q14116 193 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ATG4DQ86TL0 474 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC37A3Q8NCC5 494 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 KCNG3Q8TAE7 436 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 DCUN1D4Q92564 292 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 LINC00052Q96N35 136 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF286AQ9HBT8 521 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 VWA8A3KMH1 1905 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 A0A0B4J293 547 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 GATA3P23771 443 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 HTR1DP28221 377 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 FUT6P51993 359 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 CLDN18P56856 261 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 MMDQ15546 238 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 FAM120AOSQ5T036 256 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 RNF165Q6ZSG1 346 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 SCGB1C1Q8TD33 95 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 SPAG8Q99932 426 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 PKP2Q99959 881 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLA2Q9H6Q3 261 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 PEMTQ9UBM1 199 aa4.89□□□□□ -1.63
CDC42BPA-209ENST00000448940 TMEM131Q92545 1883 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 SRCAPQ6ZRS2 3230 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 SS18L1O75177 396 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 HIST1H1CP16403 213 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZAR1Q86SH2 424 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 TMEM163Q8TC26 289 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 ITLN2Q8WWU7 325 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 STON2Q8WXE9 905 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 ERGIC1Q969X5 290 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 FGGYQ96C11 551 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 FLYWCH2Q96CP2 140 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 HSPB11Q9Y547 144 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 PEX16Q9Y5Y5 336 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 COL4A4P53420 1690 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 A0A0A6YYH2 397 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 A0A0A6YYJ9 748 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 BORCS7-ASMTA0A0B4J1R7 106 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 A0A1B0GTL3 188 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 A6NJ64 397 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 KCNAB3O43448 404 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 UCHL1P09936 223 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 SPI1P17947 270 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 SELPLGQ14242 412 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 AADACL3Q5VUY0 350 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC35G3Q8N808 338 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 BORCS7Q96B45 105 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 TSSK2Q96PF2 358 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 LRRC42Q9Y546 428 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 KIR2DS1A0A191URI9 304 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 LEUTXA8MZ59 168 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 LYNX1G3V0Z9 82 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 UBBP0CG47 229 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 LYNX1P0DP58 116 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 CD36P16671 472 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF93P35789 620 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 RBMXP38159 391 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 KIR2DS4P43632 304 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 LHX2P50458 406 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 PRDX4Q13162 271 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 KIR2DS1Q14954 304 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 OXA1LQ15070 435 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 LINC00303Q3SY05 128 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 FAM209BQ5JX69 171 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 SHISA2Q6UWI4 295 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 STARD4Q96DR4 205 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 TSNAXQ99598 290 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 COQ10BQ9H8M1 238 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 PURGQ9UJV8 347 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 PSMB11A5LHX3 300 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 PIN1P1O15428 100 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 PRSS23O95084 383 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 CYB5R3P00387 301 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 RBP4P02753 201 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 CGB7P0DN87 165 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF121P58317 390 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 PYDC2Q56P42 97 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 TMEM236Q5W0B7 351 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 MFSD4AQ8N468 514 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 MS4A10Q96PG2 267 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 SORCS2Q96PQ0 1159 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 C19orf24Q9BVV8 132 aa4.88□□□□□ -1.63
CDC42BPA-209ENST00000448940 TPPP3Q9BW30 176 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms