RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ZNF788Q6ZQV5 615 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 LRRTM1Q86UE6 522 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 LYPD6Q86Y78 171 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 MKXQ8IYA7 352 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 TSPAN14Q8NG11 270 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 OR51F2Q8NH61 342 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 FCGR1BQ92637 280 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 POM121Q96HA1 1249 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 SSBP3Q9BWW4 388 aaPredicted RBP13.32□□□□□ -0.28
USP39-205ENST00000442708 ZNF696Q9H7X3 374 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 MMP26Q9NRE1 261 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 HIF1ANQ9NWT6 349 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 NDUFB11Q9NX14 153 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 METRNQ9UJH8 293 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 FOXJ3Q9UPW0 622 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 POLR3KQ9Y2Y1 108 aaPredicted RBP13.32□□□□□ -0.28
USP39-205ENST00000442708 A8MV72 311 aaPredicted RBP13.31□□□□□ -0.28
USP39-205ENST00000442708 INAFM1C9JVW0 142 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 DVL1O14640 695 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 RGS9O75916 674 aaPredicted RBP13.31□□□□□ -0.28
USP39-205ENST00000442708 KDM4BO94953 1096 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 SFTPBP07988 381 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 CPT2P23786 658 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 GNB2P62879 340 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 NEDD8Q15843 81 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 DGUOKQ16854 277 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 SMIM21Q3B7S5 101 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 NLRC3Q7RTR2 1065 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 SAXO1Q8IYX7 474 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 TMEM186Q96B77 213 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 NEK6Q9HC98 313 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 CKLFQ9UBR5 152 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 MAB21L2Q9Y586 359 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 HIVEP2P31629 2446 aa13.31□□□□□ -0.28
USP39-205ENST00000442708 WNK2Q9Y3S1 2297 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 TRAV20A0A0B4J274 112 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 C22orf46C9J442 243 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 SIGLEC5O15389 551 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 MAGEB3O15480 346 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 FOXH1O75593 365 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 PRDX2P32119 198 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 ZNF93P35789 620 aaPredicted RBP13.3□□□□□ -0.28
USP39-205ENST00000442708 PTGFRP43088 359 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 GABRA2P47869 451 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 IKZF1Q13422 519 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 TRAM1Q15629 374 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 SYT6Q5T7P8 510 aaPredicted RBP13.3□□□□□ -0.28
USP39-205ENST00000442708 CD200R1LQ6Q8B3 271 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 ASCL4Q6XD76 172 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 GLCCI1Q86VQ1 547 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 FAM58AQ8N1B3 248 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 ZSCAN4Q8NAM6 433 aaPredicted RBP13.3□□□□□ -0.28
USP39-205ENST00000442708 ZNRF1Q8ND25 227 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 TNFAIP8L1Q8WVP5 186 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 THRSPQ92748 146 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 EMG1Q92979 244 aaKnown RBP13.3□□□□□ -0.28
USP39-205ENST00000442708 MUL1Q969V5 352 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 DACT3Q96B18 629 aaPredicted RBP13.3□□□□□ -0.28
USP39-205ENST00000442708 SDSLQ96GA7 329 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 GPER1Q99527 375 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 DNTTIP1Q9H147 329 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 CLN8Q9UBY8 286 aa13.3□□□□□ -0.28
USP39-205ENST00000442708 ANK3Q12955 4377 aaKnown RBP13.3□□□□□ -0.28
USP39-205ENST00000442708 MXRA5Q9NR99 2828 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 A0A087WXM4 84 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 TRIM64CA6NLI5 447 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 CCRL2O00421 344 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 CDRT1O95170 752 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 KNG1P01042 644 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 AVPP01185 164 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 PSMA1P25786 263 aaKnown RBP13.29□□□□□ -0.28
USP39-205ENST00000442708 DUSP1P28562 367 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 SNU13P55769 128 aaKnown RBP13.29□□□□□ -0.28
USP39-205ENST00000442708 IL17RELQ6ZVW7 336 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 PXT1Q8NFP0 134 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 OR10K1Q8NGX5 313 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 GFI1Q99684 422 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 CNTD2Q9H8S5 307 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 ELL3Q9HB65 397 aaPredicted RBP13.29□□□□□ -0.28
USP39-205ENST00000442708 HMG20AQ9NP66 347 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 OR14J1Q9UGF5 321 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 KCNS2Q9ULS6 477 aa13.29□□□□□ -0.28
USP39-205ENST00000442708 SHISA3A0PJX4 238 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 NKX6-3A6NJ46 265 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 CYB5AP00167 134 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 SMIM18P0DKX4 95 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 PRKACAP17612 351 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 SRMP19623 302 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 IL13RA1P78552 427 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 CR1LQ2VPA4 569 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 HSD17B12Q53GQ0 312 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 C1orf229Q6ZS94 237 aaPredicted RBP13.28□□□□□ -0.28
USP39-205ENST00000442708 SLC36A1Q7Z2H8 476 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 Q8IYB0 196 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 OR4D6Q8NGJ1 314 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 ST8SIA4Q92187 359 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 PHYHIPQ92561 330 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 MED30Q96HR3 178 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 TMPRSS13Q9BYE2 586 aa13.28□□□□□ -0.28
USP39-205ENST00000442708 FAM192AQ9GZU8 254 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms