RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 CRIP3Q6Q6R5 217 aa16.5■□□□□ 0.23
NCKIPSD-206ENST00000439518 SLC25A26Q70HW3 274 aa16.5■□□□□ 0.23
NCKIPSD-206ENST00000439518 FAM220AQ7Z4H9 259 aa16.5■□□□□ 0.23
NCKIPSD-206ENST00000439518 DNAAF1Q8NEP3 725 aa16.5■□□□□ 0.23
NCKIPSD-206ENST00000439518 PP6455Q8WZ26 134 aa16.5■□□□□ 0.23
NCKIPSD-206ENST00000439518 SEBOXQ9HB31 216 aaPredicted RBP16.5■□□□□ 0.23
NCKIPSD-206ENST00000439518 PIPP12273 146 aaPredicted RBP16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 PAX6P26367 422 aa16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 ACTC1P68032 377 aa16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 ACTA1P68133 377 aa16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 KPNB1Q14974 876 aaKnown RBP16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 LRRC75BQ2VPJ9 315 aa16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 KCTD20Q7Z5Y7 419 aa16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 ASCC1Q8N9N2 400 aaKnown RBP16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 PPP1R35Q8TAP8 253 aa16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 ADAT3Q96EY9 351 aaPredicted RBP16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 BORCS8Q96FH0 119 aa16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 TCF7L1Q9HCS4 588 aa16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 FRRS1LQ9P0K9 344 aa16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 FBLN5Q9UBX5 448 aa16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 ORC6Q9Y5N6 252 aa16.49■□□□□ 0.23
NCKIPSD-206ENST00000439518 IGKV1-9A0A0C4DH69 117 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 FAM90A8PA6NJQ4 464 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 SLC16A6O15403 523 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 RBP4P02753 201 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 ISG15P05161 165 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 COX7A1P24310 79 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 ALDH3A2P51648 485 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 BMXP51813 675 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 NANOS3P60323 173 aaKnown RBP16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 CNN3Q15417 329 aaKnown RBP16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 TMEM244Q5VVB8 128 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 MEDAGQ5VYS4 303 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 ZNF782Q6ZMW2 699 aaPredicted RBP16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 UTS2BQ765I0 119 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 EGFL6Q8IUX8 553 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 OR8H2Q8N162 312 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 PIFOQ8TCI5 191 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 RNFT2Q96EX2 444 aa16.48■□□□□ 0.23
NCKIPSD-206ENST00000439518 DAPL1A0PJW8 107 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 TMEM82A0PJX8 343 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 ZNF728P0DKX0 622 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 RBP2P50120 134 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 OR12D2P58182 307 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 ZIK1Q3SY52 487 aaPredicted RBP16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 ZFP1Q6P2D0 407 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 GDPD3Q7L5L3 318 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 FGGYQ96C11 551 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 SNX22Q96L94 193 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 MBOAT4Q96T53 435 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 MMP27Q9H306 513 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 IL36RNQ9UBH0 155 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 DSCAML1Q8TD84 2053 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 TGP01266 2768 aa16.47■□□□□ 0.23
NCKIPSD-206ENST00000439518 MEGF11A6BM72 1044 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 INMTO95050 263 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 GABRA5P31644 462 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 NPBWR2P48146 333 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 CCR9P51686 369 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 ATP1B3P54709 279 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 MTCP1P56278 107 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 LGALS4P56470 323 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 DEFA6Q01524 100 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 MEF2CQ06413 473 aaPredicted RBP16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 LY6EQ16553 131 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 TCF23Q7RTU1 214 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 LHFPL4Q7Z7J7 247 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 Q8IYB0 196 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 CBR4Q8N4T8 237 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 ACBD7Q8N6N7 88 aa16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 EMG1Q92979 244 aaKnown RBP16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 EXOGQ9Y2C4 368 aaKnown RBP16.46■□□□□ 0.23
NCKIPSD-206ENST00000439518 MEX3AA1L020 520 aaKnown RBP16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 VGLL3A8MV65 326 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 ODF3BA8MYP8 253 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 HAND1O96004 215 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 IGHA1P01876 353 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 GABRB1P18505 474 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 ATF1P18846 271 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 PRKACBP22694 351 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 AZGP1P25311 298 aaKnown RBP16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 KIR2DS4P43632 304 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 EDDM3BP56851 147 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 ZNF91Q05481 1191 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 ZNF146Q15072 292 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 ENTHD1Q8IYW4 607 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR52N4Q8NGI2 321 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 LGALS12Q96DT0 336 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 PELI1Q96FA3 418 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 RBFOX1Q9NWB1 397 aaKnown RBP16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 AASSQ9UDR5 926 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 SIGLEC9Q9Y336 463 aa16.45■□□□□ 0.22
NCKIPSD-206ENST00000439518 TRBV2A0A0J9YWF9 115 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 OR4C45A6NMZ5 311 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 IGHV1-8P0DP01 117 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 ZNF20P17024 532 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 EFNB2P52799 333 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 LDLRAD2Q5SZI1 272 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 ZNF626Q68DY1 528 aa16.44■□□□□ 0.22
NCKIPSD-206ENST00000439518 FAM58AQ8N1B3 248 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms