RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 TRAV30A0A087WSZ9 112 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 H0Y8G0 127 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 SIVA1O15304 175 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 FGF10O15520 208 aaPredicted RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 RBFOX2O43251 390 aaKnown RBP eCLIP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 MMP23AO75900 390 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 NUDT3O95989 172 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 PDGFBP01127 241 aaPredicted RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 LIPFP07098 398 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 IRF1P10914 325 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 FOLR1P15328 257 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 BCL6P41182 706 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 CCR2P41597 374 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 CLDN18P56856 261 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 ACVR1Q04771 509 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 ICAM4Q14773 271 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 DACT2Q5SW24 774 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 SMIM20Q8N5G0 67 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 OR1B1Q8NGR6 318 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 ZPLD1Q8TCW7 415 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 C2orf15Q8WU43 125 aaKnown RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 GPR146Q96CH1 333 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 NUS1Q96E22 293 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 PRRT1Q99946 306 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 SMIM7Q9BQ49 75 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 C20orf144Q9BQM9 153 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 RTBDNQ9BSG5 229 aaPredicted RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 SRD5A3Q9H8P0 318 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 ZDHHC3Q9NYG2 299 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 PPP1R3CQ9UQK1 317 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 OSGIN2Q9Y236 505 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 TBL2Q9Y4P3 447 aaKnown RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 SHANK1Q9Y566 2161 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 MGAMO43451 1857 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 ANKRD31Q8N7Z5 1873 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 A0A1W2PQU0 124 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 SERF1AO75920 110 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 ONECUT2O95948 504 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 EGR1P18146 543 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 ALOX5APP20292 161 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 IMPA1P29218 277 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 PTGER4P35408 488 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 RPS24P62847 133 aaKnown RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 PAFAH1B2P68402 229 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 TMEM267Q0VDI3 215 aaPredicted RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 NFATC2Q13469 925 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 ZNF266Q14584 549 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 PLA2G2CQ5R387 149 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 FAM78BQ5VT40 261 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 MFSD12Q6NUT3 480 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 GDF7Q7Z4P5 450 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 H1FOOQ8IZA3 346 aaPredicted RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 AQP3Q92482 292 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 C19orf24Q9BVV8 132 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 CDH20Q9HBT6 801 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 GP6Q9HCN6 339 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 IL23AQ9NPF7 189 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 P2RX2Q9UBL9 471 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 UQCR10Q9UDW1 63 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 SLC22A13Q9Y226 551 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 INSL5Q9Y5Q6 135 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 SLX4Q8IY92 1834 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 SHISA8B8ZZ34 492 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 J3QRE1 110 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 TNFRSF10CO14798 259 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 CDS2O95674 445 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 OPN1MWP04001 364 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 HMGN2P05204 90 aaKnown RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 H2BFMP0C1H6 154 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 OPN1MW2P0DN77 364 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 OPN1MW3P0DN78 364 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 SLC6A9P48067 706 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 CX3CR1P49238 355 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 PFN3P60673 137 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 RPS4XP62701 263 aaKnown RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 GABRA6Q16445 453 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 MS4A13Q5J8X5 152 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 RPL22L1Q6P5R6 122 aaKnown RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 KCTD18Q6PI47 426 aaPredicted RBP6.03□□□□□ -1.44
CNOT4-205ENST00000423368 OR5AU1Q8NGC0 362 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 SPATA33Q96N06 139 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 RASL10BQ96S79 203 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 PAAF1Q9BRP4 392 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 NMES1Q9C002 83 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 VDAC3Q9Y277 283 aa6.03□□□□□ -1.44
CNOT4-205ENST00000423368 POLR2AP24928 1970 aaKnown RBP6.02□□□□□ -1.45
CNOT4-205ENST00000423368 EP400Q96L91 3159 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 MUC21A0A0G2JKD1 596 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 MUC21A0A140T8X8 626 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 TMEM202A6NGA9 273 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 H3BP45 60 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 J3KRW8 73 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 ZNF749O43361 778 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 LMX1BO60663 402 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 CLEC3AO75596 197 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 B3GAT3O94766 335 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 THY1P04216 161 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 PET100P0DJ07 73 aa6.02□□□□□ -1.45
CNOT4-205ENST00000423368 HIST1H1CP16403 213 aaKnown RBP6.02□□□□□ -1.45
CNOT4-205ENST00000423368 TSPOP30536 169 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms