RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 HIST3H3Q16695 136 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 HIKESHIQ53FT3 197 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 RPUSD3Q6P087 351 aaKnown RBP11.58□□□□□ -0.56
MCF2L-213ENST00000421756 ETV3LQ6ZN32 361 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 TMEM217Q8N7C4 229 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 OR6S1Q8NH40 331 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 RTN4IP1Q8WWV3 396 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-213ENST00000421756 WDR54Q9H977 334 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 MED13LQ71F56 2210 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 NCKAP5O14513 1909 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 LRRC3CA6NJW4 275 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 TMEM127O75204 238 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 ONECUT2O95948 504 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 PRH1P02810 166 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 CRIP3Q6Q6R5 217 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 GGNQ86UU5 652 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 ZNF100Q8IYN0 542 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 EMG1Q92979 244 aaKnown RBP11.58□□□□□ -0.56
MCF2L-213ENST00000421756 WNT5BQ9H1J7 359 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 PRELID1Q9Y255 219 aa11.58□□□□□ -0.56
MCF2L-213ENST00000421756 ARHGAP21Q5T5U3 1957 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 H3BP45 60 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 ABCD4O14678 606 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 HSD17B6O14756 317 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 IFNA2P01563 188 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 ZNF728P0DKX0 622 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 TPT1P13693 172 aaKnown RBP11.57□□□□□ -0.56
MCF2L-213ENST00000421756 NFYBP25208 207 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 THBS4P35443 961 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 CAV2P51636 162 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 ZFP36L1Q07352 338 aaKnown RBP11.57□□□□□ -0.56
MCF2L-213ENST00000421756 SRSF6Q13247 344 aaKnown RBP11.57□□□□□ -0.56
MCF2L-213ENST00000421756 FAM27BQ5VT28 67 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 GGNBP1Q5YKI7 109 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 NSUN5P2Q63ZY6 315 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 CXorf67Q86X51 503 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-213ENST00000421756 PTX4Q96A99 478 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 OR2H1Q9GZK4 316 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 GPR35Q9HC97 309 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 RBM7Q9Y580 266 aaKnown RBP11.57□□□□□ -0.56
MCF2L-213ENST00000421756 MED12LQ86YW9 2145 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 ZNF503-AS2A6NEH8 195 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 TTLL8A6PVC2 850 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 LILRA1O75019 489 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 TSPAN9O75954 239 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 TAS2R46P59540 309 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 C2CD4CQ8TF44 421 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 PLPPR2Q96GM1 343 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 SGCZQ96LD1 299 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 ANXA10Q9UJ72 324 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 USF3Q68DE3 2245 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 K7EPK0 472 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 IFNA21P01568 189 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 CD8AP01732 235 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 NR2C1P13056 603 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 CD80P33681 288 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 OR1C1Q15619 314 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 HAGHLQ6PII5 290 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-213ENST00000421756 OVCH2Q7RTZ1 564 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 ARRDC1Q8N5I2 433 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 FAM71E2Q8N5Q1 922 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 M1APQ8TC57 530 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 PP6455Q8WZ26 134 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 PIK3IP1Q96FE7 263 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 TIMM10BQ9Y5J6 103 aa11.57□□□□□ -0.56
MCF2L-213ENST00000421756 LOC102723996A0A087X1L8 192 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 IGLV3-32A0A0A0MS00 114 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 ARGFXA6NJG6 315 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 NPIPB13A6NJU9 1138 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 NPIPB4C9JG80 1138 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 FGF2P09038 288 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 SRD5A2P31213 254 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 SMCO1Q147U7 214 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 MRPL21Q7Z2W9 205 aaKnown RBP11.56□□□□□ -0.56
MCF2L-213ENST00000421756 OR52H1Q8NGJ2 320 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 TMEM54Q969K7 222 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 MARC2Q969Z3 335 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 FOXD3Q9UJU5 478 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-213ENST00000421756 GJE1A6NN92 205 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 KRBOX1C9JBD0 128 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 NTN3O00634 580 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-213ENST00000421756 MSTNO14793 375 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 WISP2O76076 250 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 TFF1P04155 84 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 BCL3P20749 454 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 FPR2P25090 351 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 TAS2R31P59538 309 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 HERV-K104P61576 105 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 MRPS34P82930 218 aaKnown RBP11.56□□□□□ -0.56
MCF2L-213ENST00000421756 ZNF529Q6P280 563 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 UBALD2Q8IYN6 164 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 OSR2Q8N2R0 312 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 TAF9BQ9HBM6 251 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 FZR1Q9UM11 496 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 OR6C65A6NJZ3 312 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 C9orf172C9J069 976 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 SYNGR3O43761 229 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 PPT1P50897 306 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 B3GALT5-AS1P59052 145 aa11.56□□□□□ -0.56
MCF2L-213ENST00000421756 RAB1AP62820 205 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms