RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 ASPDHA6ND91 283 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 PDE6DO43924 150 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 PGA4P0DJD7 388 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 PGA5P0DJD9 388 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 OR2T6Q8NHC8 308 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 ZSWIM8A7E2V4 1837 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 PLXND1Q9Y4D7 1925 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 TP53I13Q8NBR0 393 aaPredicted RBP11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 DUSP13Q9UII6 198 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 ING1Q9UK53 422 aaPredicted RBP11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 RAB29O14966 203 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 THBS4P35443 961 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 COL19A1Q14993 1142 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 OR2M3Q8NG83 312 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 ADAT3Q96EY9 351 aaPredicted RBP11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 C20orf141Q9NUB4 165 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 AMDHD2Q9Y303 409 aa11.14□□□□□ -0.63
SRGAP3-202ENST00000383836 C5orf49A4QMS7 147 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 SBK3P0C264 359 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 CEBPBP17676 345 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 MVDP53602 400 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 ZNF687Q8N1G0 1237 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 FAM174AQ8TBP5 190 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 UTP23Q9BRU9 249 aaKnown RBP11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 CRHP06850 196 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 ZBTB25P24278 435 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 GABRA6Q16445 453 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 LILRA3Q8N6C8 439 aaPredicted RBP11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 AP5S1Q9NUS5 200 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 NBASA2RRP1 2371 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 HLA-GP17693 338 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 IL24Q13007 206 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 SHBQ15464 509 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 OR1C1Q15619 314 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 UBR3Q6ZT12 1888 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 A0A1B0GV72 72 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 EIF3GO75821 320 aaKnown RBP eCLIP11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 ZFPL1O95159 310 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 FABP2P12104 132 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 RPS27P42677 84 aaKnown RBP11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 LGALS4P56470 323 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 SLC25A26Q70HW3 274 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 PELI1Q96FA3 418 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 GPX7Q96SL4 187 aaPredicted RBP11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 ST8SIA5O15466 376 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 SLC25A5P05141 298 aaKnown RBP11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 PAFAH1B2P68402 229 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 SCGB1D4Q6XE38 83 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 ST8SIA1Q92185 356 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 MRPS24Q96EL2 167 aaKnown RBP11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 ACY3Q96HD9 319 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 KCNK15Q9H427 330 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 COL5A3P25940 1745 aaPredicted RBP11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 TARM1B6A8C7 271 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 EMDP50402 254 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 SLC25A1P53007 311 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 DDA1Q9BW61 102 aa11.13□□□□□ -0.63
SRGAP3-202ENST00000383836 CD22P20273 847 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 BSGP35613 385 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 OR2A5Q96R48 311 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 ADAMTS7Q9UKP4 1686 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 FBLL1A6NHQ2 334 aaKnown RBP11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 C1QTNF6Q9BXI9 259 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 GPR61Q9BZJ8 451 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 B9D1Q9UPM9 204 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 TMPRSS11DO60235 418 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 FCMRO60667 390 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 BRS3P32247 399 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 C12orf54Q6X4T0 127 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 OR5A2Q8NGI9 324 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 SRD5A3Q9H8P0 318 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 PRR35P0CG20 571 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 BOD1Q96IK1 185 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 RPS4Y1P22090 263 aaKnown RBP11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 CD82P27701 267 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 CLDN15P56746 228 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 FZD2Q14332 565 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 MPV17LQ2QL34 196 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 OXGR1Q96P68 337 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 TMPRSS13Q9BYE2 586 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 TPSD1Q9BZJ3 242 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 HSF4Q9ULV5 492 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 TLCD2A6NGC4 264 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 APCSP02743 223 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 ZNF880Q6PDB4 577 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 NEU3Q9UQ49 428 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 PLXNB3Q9ULL4 1909 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 FUT3P21217 361 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 IRS1P35568 1242 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 RPS16P62249 146 aaKnown RBP11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 CD300LDQ6UXZ3 194 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 NUFIP2Q7Z417 695 aaKnown RBP11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 SLC46A2Q9BY10 475 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 HES4Q9HCC6 221 aa11.12□□□□□ -0.63
SRGAP3-202ENST00000383836 PMS2P1A4D2B8 440 aa11.11□□□□□ -0.63
SRGAP3-202ENST00000383836 MFSD2BA6NFX1 497 aa11.11□□□□□ -0.63
SRGAP3-202ENST00000383836 PRSS1P07477 247 aa11.11□□□□□ -0.63
SRGAP3-202ENST00000383836 S100A4P26447 101 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms