RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 SYT7O43581 403 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 TSPAN9O75954 239 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 NR2C1P13056 603 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 ZBTB25P24278 435 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 TAS2R31P59538 309 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 ZNF273Q14593 569 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 KCNMB1Q16558 191 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 ZNF546Q86UE3 836 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 LURAP1LQ8IV03 231 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 CCDC36Q8IYA8 594 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 NOXO1Q8NFA2 376 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 OR1J2Q8NGS2 313 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 MITD1Q8WV92 249 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 SLC6A7Q99884 636 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 CNTD2Q9H8S5 307 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 TNFSF18Q9UNG2 199 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 LOC102725191A0A1B0GVB3 256 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.68□□□□□ -0.7
VRK3-202ENST00000377011 TMEM235A6NFC5 223 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 OR5H14A6NHG9 310 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 TMEM14DPA8MWL7 114 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 ZNF878C9JN71 531 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 TOR1AO14656 332 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 BCL2L11O43521 198 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 DNPH1O43598 174 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 HLA-AP01891 365 aaKnown RBP10.68□□□□□ -0.7
VRK3-202ENST00000377011 GSTP1P09211 210 aaKnown RBP10.68□□□□□ -0.7
VRK3-202ENST00000377011 COX5AP20674 150 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 FLNAP21333 2647 aaKnown RBP10.68□□□□□ -0.7
VRK3-202ENST00000377011 BIDP55957 195 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 BTN1A1Q13410 526 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 MOGAT2Q3SYC2 334 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 OTPQ5XKR4 325 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 C11orf87Q6NUJ2 197 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 Q6ZT83 130 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 PGAP1Q75T13 922 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 TMED4Q7Z7H5 227 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 TRAPPC6BQ86SZ2 158 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 TMEM17Q86X19 198 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 LINC00346Q8IVM7 164 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 UEVLDQ8IX04 471 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 ZNF100Q8IYN0 542 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 ST8SIA2Q92186 375 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 NEUROG1Q92886 237 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 FGGYQ96C11 551 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 CENPMQ9NSP4 180 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 RASL12Q9NYN1 266 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 NDRG3Q9UGV2 375 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 PLCE1Q9P212 2302 aa10.68□□□□□ -0.7
VRK3-202ENST00000377011 ZANQ9Y493 2812 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 KANTRA0A1W2PQU2 76 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 RAD51DO75771 328 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 IGHG1P01857 330 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 NAT1P18440 290 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 CCL1P22362 96 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 IL32P24001 234 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 UNC119Q13432 240 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 TESK1Q15569 626 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 PNLIPRP3Q17RR3 467 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 CDNFQ49AH0 187 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 PHYHD1Q5SRE7 291 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 FBXW9Q5XUX1 488 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 PAQR4Q8N4S7 273 aaPredicted RBP10.67□□□□□ -0.7
VRK3-202ENST00000377011 OR5T2Q8NGG2 359 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 OR10R2Q8NGX6 335 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 APH1AQ96BI3 265 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 ZNF837Q96EG3 531 aaPredicted RBP10.67□□□□□ -0.7
VRK3-202ENST00000377011 PHB2Q99623 299 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 IFT46Q9NQC8 304 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 VSIG4Q9Y279 399 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 NOP16Q9Y3C1 178 aaKnown RBP10.67□□□□□ -0.7
VRK3-202ENST00000377011 MTORP42345 2549 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 USF3Q68DE3 2245 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 IGKV1D-43A0A0B4J1Z2 117 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 CEACAM18A8MTB9 384 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 EIF1BO60739 113 aaKnown RBP10.67□□□□□ -0.7
VRK3-202ENST00000377011 MRPL33O75394 65 aaKnown RBP10.67□□□□□ -0.7
VRK3-202ENST00000377011 PGA4P0DJD7 388 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 PGA3P0DJD8 388 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 VSIG8P0DPA2 414 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 ZNF20P17024 532 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 GNALP38405 381 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 CBX5P45973 191 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 CLRN1P58418 232 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 STK11Q15831 433 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 SCGB2B2Q4G0G5 96 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 CORO6Q6QEF8 472 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 UQCC3Q6UW78 93 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 ACOT7LQ6ZUV0 252 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 MOB3CQ70IA8 216 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 BHLHA15Q7RTS1 189 aaPredicted RBP10.67□□□□□ -0.7
VRK3-202ENST00000377011 OR52N4Q8NGI2 321 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 OR10S1Q8NGN2 331 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 OR2AJ1Q8NGZ0 328 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 OR6X1Q8NH79 312 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 LILRB1Q8NHL6 650 aaPredicted RBP10.67□□□□□ -0.7
VRK3-202ENST00000377011 PLPPR2Q96GM1 343 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 NAA11Q9BSU3 229 aaPredicted RBP10.67□□□□□ -0.7
VRK3-202ENST00000377011 MED29Q9NX70 200 aa10.67□□□□□ -0.7
VRK3-202ENST00000377011 ARID1AO14497 2285 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms