RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 PRKACAP17612 351 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 RAB6AP20340 208 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 GLRA1P23415 457 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 CFHR2P36980 270 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 ERVK11-1P61568 191 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 ELP2Q6IA86 826 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 CNIH2Q6PI25 160 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 CDH24Q86UP0 819 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 Q8IYB0 196 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 FAM58AQ8N1B3 248 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 GCSAMQ8N6F7 178 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 POC1AQ8NBT0 407 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 OR51T1Q8NGJ9 327 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 RAB40AQ8WXH6 277 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 NRGNQ92686 78 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 EMG1Q92979 244 aaKnown RBP9.23□□□□□ -0.93
BRCC3-204ENST00000369462 S100A16Q96FQ6 103 aaKnown RBP9.23□□□□□ -0.93
BRCC3-204ENST00000369462 TSC22D3Q99576 134 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 URM1Q9BTM9 101 aaKnown RBP9.23□□□□□ -0.93
BRCC3-204ENST00000369462 RNF7Q9UBF6 113 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 ADAM30Q9UKF2 790 aa9.23□□□□□ -0.93
BRCC3-204ENST00000369462 CSMD2Q7Z408 3487 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 ARID1AO14497 2285 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 DYSFO75923 2080 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 IGHV1-69-2A0A0G2JMI3 117 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 NOS1APO75052 506 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-204ENST00000369462 ZNF205O95201 554 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 CYB5R3P00387 301 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-204ENST00000369462 ACAA1P09110 424 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-204ENST00000369462 DUSP1P28562 367 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 VEGFCP49767 419 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 FGF12P61328 243 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 RPS27AP62979 156 aaKnown RBP9.22□□□□□ -0.93
BRCC3-204ENST00000369462 LSAMPQ13449 338 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 PDCD1Q15116 288 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 TAF9Q16594 264 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 FAM201AQ5SY85 155 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 Q8NFD4 153 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 OR11L1Q8NGX0 322 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 Q8TCH9 128 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 PHF21AQ96BD5 680 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 MRPS24Q96EL2 167 aaKnown RBP9.22□□□□□ -0.93
BRCC3-204ENST00000369462 CMTM3Q96MX0 182 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 WDFY2Q96P53 400 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 HMG20AQ9NP66 347 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 EXTL2Q9UBQ6 330 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 SRRM5B3KS81 715 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 LYNX1G3V0Z9 82 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 H7C417 338 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 GEMIN2O14893 280 aaKnown RBP9.22□□□□□ -0.93
BRCC3-204ENST00000369462 NDUFS7O75251 213 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 LYNX1P0DP58 116 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 IRF2P14316 349 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 GABRR1P24046 479 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 CDK2P24941 298 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 SSTR2P30874 369 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 TALDO1P37837 337 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 PITPNBP48739 271 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 SPANXN2Q5MJ10 180 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 ZNF787Q6DD87 383 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 SFRP4Q6FHJ7 346 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-204ENST00000369462 LINC00299Q6ZSB3 139 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 IZUMO1Q8IYV9 350 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 C19orf18Q8NEA5 215 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 OR4M1Q8NGD0 313 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 OR10Z1Q8NGY1 313 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 Q96M66 194 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 CCL19Q99731 98 aa9.22□□□□□ -0.93
BRCC3-204ENST00000369462 MRPS7Q9Y2R9 242 aaKnown RBP9.22□□□□□ -0.93
BRCC3-204ENST00000369462 A0A0A6YYD4 124 aa9.21□□□□□ -0.93
BRCC3-204ENST00000369462 LRRC30A6NM36 301 aa9.21□□□□□ -0.93
BRCC3-204ENST00000369462 EGR1P18146 543 aa9.21□□□□□ -0.93
BRCC3-204ENST00000369462 CPT2P23786 658 aa9.21□□□□□ -0.93
BRCC3-204ENST00000369462 RBM11P57052 281 aaKnown RBP9.21□□□□□ -0.93
BRCC3-204ENST00000369462 MOGAT2Q3SYC2 334 aa9.21□□□□□ -0.93
BRCC3-204ENST00000369462 CCDC190Q86UF4 302 aa9.21□□□□□ -0.93
BRCC3-204ENST00000369462 HPS1Q92902 700 aa9.21□□□□□ -0.93
BRCC3-204ENST00000369462 MAP1AP78559 2803 aaPredicted RBP9.21□□□□□ -0.93
BRCC3-204ENST00000369462 APCP25054 2843 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 FABP12A6NFH5 140 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.21□□□□□ -0.94
BRCC3-204ENST00000369462 OVOL3O00110 214 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 RAB27BO00194 218 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 SOCS1O15524 211 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 OR7C1O76099 320 aaPredicted RBP9.21□□□□□ -0.94
BRCC3-204ENST00000369462 LHBP01229 141 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 ATF4P18848 351 aaPredicted RBP9.21□□□□□ -0.94
BRCC3-204ENST00000369462 COL8A2P25067 703 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 KRTAP10-9P60411 292 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 HFEQ30201 348 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 NEU4Q8WWR8 484 aaPredicted RBP9.21□□□□□ -0.94
BRCC3-204ENST00000369462 RHOFQ9HBH0 211 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 HES4Q9HCC6 221 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 DIABLOQ9NR28 239 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 TMEM106BQ9NUM4 274 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 ZNF581Q9P0T4 197 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 DNAJB11Q9UBS4 358 aa9.21□□□□□ -0.94
BRCC3-204ENST00000369462 ASH1LQ9NR48 2969 aaKnown RBP9.2□□□□□ -0.94
BRCC3-204ENST00000369462 SCN1BQ07699 218 aa9.2□□□□□ -0.94
BRCC3-204ENST00000369462 SMIM21Q3B7S5 101 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms