RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 A0A0A6YYD5 115 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 IGHV6-1A0A0B4J1U7 121 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 IGHV3-73A0A0B4J1V6 119 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 OR5H14A6NHG9 310 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 C5orf67F2Z3F1 127 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 TRAPPC2LH3BP13 241 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 GOLGA8SH3BPF8 625 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 ITGB1BP1O14713 200 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 RAD51CO43502 376 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 CREB3O43889 395 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 ORC5O43913 435 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 NOS1APO75052 506 aaPredicted RBP-0.76□□□□□ -2.53
MIR539-201ENST00000365690 TBCAO75347 108 aaKnown RBP-0.76□□□□□ -2.53
MIR539-201ENST00000365690 KRT75O95678 551 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 MBD3O95983 291 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 CFDP00746 253 aaPredicted RBP-0.76□□□□□ -2.53
MIR539-201ENST00000365690 TRBV12-3P01733 135 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 NT5EP21589 574 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 CALRP27797 417 aaKnown RBP-0.76□□□□□ -2.53
MIR539-201ENST00000365690 RAB7AP51149 207 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 SSR4P51571 173 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 KIAA1024LP59773 190 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 ACTR3P61158 418 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 RBM3P98179 157 aaKnown RBP-0.76□□□□□ -2.53
MIR539-201ENST00000365690 WDR43Q15061 677 aaKnown RBP eCLIP-0.76□□□□□ -2.53
MIR539-201ENST00000365690 C1orf185Q5T7R7 199 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 TMEM236Q5W0B7 351 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 FAM173BQ6P4H8 233 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 BLOC1S2Q6QNY1 142 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 KDELC1Q6UW63 502 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 SBSNQ6UWP8 590 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 LINC00575Q6W349 94 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 SCGB1D4Q6XE38 83 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 WDR88Q6ZMY6 472 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 MBOAT1Q6ZNC8 495 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 SDIM1Q6ZPB5 146 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 FAM231DQ6ZW35 169 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 LHFPL1Q86WI0 220 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 RNF148Q8N7C7 305 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 BCORP1Q8N888 145 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 YIPF7Q8N8F6 280 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 SLC30A7Q8NEW0 376 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 OR56A4Q8NGH8 313 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 SLC7A13Q8TCU3 470 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 TCP10LQ8TDR4 215 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 TWIST2Q8WVJ9 160 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 PIBF1Q8WXW3 757 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 AQP3Q92482 292 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 RBM14Q96PK6 669 aaKnown RBP-0.76□□□□□ -2.53
MIR539-201ENST00000365690 HBEGFQ99075 208 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 ANKRD60Q9BZ19 345 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 SMDT1Q9H4I9 107 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 TMEM185BQ9H7F4 350 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 OR5AC2Q9NZP5 309 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 RPUSD1Q9UJJ7 312 aaKnown RBP-0.76□□□□□ -2.53
MIR539-201ENST00000365690 KLK9Q9UKQ9 250 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 LINC00588Q9Y4M8 146 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 CUX2O14529 1486 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 PEAK1Q9H792 1746 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 SLX4Q8IY92 1834 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 DENND4CQ5VZ89 1909 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 YLPM1P49750 1951 aaKnown RBP-0.76□□□□□ -2.53
MIR539-201ENST00000365690 ZNF638Q14966 1978 aaKnown RBP-0.76□□□□□ -2.53
MIR539-201ENST00000365690 MED12LQ86YW9 2145 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 PIEZO1Q92508 2521 aa-0.76□□□□□ -2.53
MIR539-201ENST00000365690 PDZD2O15018 2839 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 MUC4Q99102 2169 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 TET1Q8NFU7 2136 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 KDM6BO15054 1643 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 SYNRGQ9UMZ2 1314 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 A0A0U1RQV5 110 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 CTAGE15A4D2H0 777 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 TMEM235A6NFC5 223 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 TRIM64A6NGJ6 449 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 TRIM64BA6NI03 449 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 ARGFXA6NJG6 315 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 NCBP2LA6PVI3 153 aaKnown RBP-0.77□□□□□ -2.53
MIR539-201ENST00000365690 LYRM9A8MSI8 78 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 HMSDA8MTL9 139 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 ZNF879B4DU55 563 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 PSPHP1O15172 72 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 CASC3O15234 703 aaKnown RBP-0.77□□□□□ -2.53
MIR539-201ENST00000365690 PSTPIP1O43586 416 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 TCF21O43680 179 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 PRKAB2O43741 272 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 OR1F1O43749 312 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 FMO6PO60774 539 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 KERAO60938 352 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 VPS26AO75436 327 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 CLPXO76031 633 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 NEBLO76041 1014 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 OR2A4O95047 310 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 C1orf105O95561 183 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 UGT2B4P06133 528 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 CD2P06729 351 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 OR4Q2P0C623 313 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 UBBP0CG47 229 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 CTSEP14091 401 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 GABRA1P14867 456 aa-0.77□□□□□ -2.53
MIR539-201ENST00000365690 FUT1P19526 365 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms