RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SFTPDP35247 375 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 EFNA3P52797 238 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 TMEM50BP56557 158 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 ZNF121P58317 390 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 RAP1BP61224 184 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 TLE4Q04727 773 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 SOHLH1Q5JUK2 328 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 ZNF343Q6P1L6 599 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 COMMD1Q8N668 190 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 OR13G1Q8NGZ3 307 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 KCNG3Q8TAE7 436 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 RNF133Q8WVZ7 376 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 ASB10Q8WXI3 467 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 PTX4Q96A99 478 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 C2orf50Q96LR7 162 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 RAB18Q9NP72 206 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 FBXL17Q9UF56 701 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 C14orf166Q9Y224 244 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 A0A1W2PNR3 127 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 ZNF727A8MUV8 499 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 B4E171 279 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 XRCC2O43543 280 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 THBS4P35443 961 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 SNCAP37840 140 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 ASCL1P50553 236 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 BLKP51451 505 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 TMEM33P57088 247 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 ERVFC1-1P60608 527 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 QRFPP83859 136 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 HERPUD1Q15011 391 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 ELOBQ15370 118 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 MIDNQ504T8 468 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 C4orf17Q53FE4 359 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 NCR3LG1Q68D85 454 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 OR10A7Q8NGE5 316 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 SLC25A43Q8WUT9 341 aaPredicted RBP7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 HPSE2Q8WWQ2 592 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 TMEM234Q8WY98 164 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 FAM131CQ96AQ9 280 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 LIN37Q96GY3 246 aaPredicted RBP7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 URM1Q9BTM9 101 aaKnown RBP7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 SLC5A7Q9GZV3 580 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 SLC26A1Q9H2B4 701 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 MTIF3Q9H2K0 278 aaKnown RBP7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 NELFAQ9H3P2 528 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 KLRF1Q9NZS2 232 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 ZNF319Q9P2F9 582 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 MEMO1Q9Y316 297 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 MTCH2Q9Y6C9 303 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 V9GYS6 101 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 BLACEA4D250 179 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 NPIPB7O75200 414 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 CHRM2P08172 466 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 POU2F2P09086 479 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 EPHA1P21709 976 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 CHATP28329 748 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 FXYD4P59646 89 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 FOXK1P85037 733 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 C9orf50Q5SZB4 431 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 Q6ZS52 159 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 C1QL2Q7Z5L3 287 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 SLC35G3Q8N808 338 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 OR8B12Q8NGG6 310 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 OR10S1Q8NGN2 331 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 FNDC9Q8TBE3 224 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 FRZBQ92765 325 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 RTBDNQ9BSG5 229 aaPredicted RBP7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 HDHD3Q9BSH5 251 aaPredicted RBP7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 CNTNAP3Q9BZ76 1288 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 OR10A2Q9H208 303 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 PITPNC1Q9UKF7 332 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 HS3ST3A1Q9Y663 406 aa7.24□□□□□ -1.25
CDC42SE1-201ENST00000357235 TRIOBPQ9H2D6 2365 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 LNP1A1A4G5 178 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 VSTM2BA6NLU5 285 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 TMEM14DPA8MWL7 114 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 SLC33A1O00400 549 aaPredicted RBP7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 TSPAN2O60636 221 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 CA11O75493 328 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 GCGP01275 180 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 TBPP20226 339 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 FBLP22087 321 aaKnown RBP7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 TAGLN2P37802 199 aaKnown RBP7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 RPL29P47914 159 aaKnown RBP7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 DLX2Q07687 328 aaPredicted RBP7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 FOXF1Q12946 379 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 ZNF774Q6NX45 483 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 C6orf201Q7Z4U5 140 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 ZNF573Q86YE8 665 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 SULF2Q8IWU5 870 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 MFSD8Q8NHS3 518 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 RNASE8Q8TDE3 154 aaKnown RBP7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 RNASEH2CQ8TDP1 164 aaKnown RBP7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 ABHD5Q8WTS1 349 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 PIGTQ969N2 578 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 SNX22Q96L94 193 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 SCGB3A2Q96PL1 93 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 KCNK17Q96T54 332 aa7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 ZNF2Q9BSG1 426 aaPredicted RBP7.23□□□□□ -1.25
CDC42SE1-201ENST00000357235 FBRSQ9HAH7 460 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms