RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 MMP24Q9Y5R2 645 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 A0A0B4J2A0 478 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 CIDEAO60543 219 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 CA11O75493 328 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 TPT1P13693 172 aaKnown RBP12.84□□□□□ -0.35
PBX3-201ENST00000342287 ZNF674Q2M3X9 581 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 IGFL2Q6UWQ7 119 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 TMEM123Q8N131 208 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 HIST3H2BBQ8N257 126 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 STEAP2Q8NFT2 490 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 RNF128Q8TEB7 428 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 TMEM100Q9NV29 134 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 SHPKQ9UHJ6 478 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 CUL9Q8IWT3 2517 aa12.84□□□□□ -0.35
PBX3-201ENST00000342287 DCDC2BA2VCK2 349 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 ZNF705GA8MUZ8 300 aaPredicted RBP12.83□□□□□ -0.36
PBX3-201ENST00000342287 MFNGO00587 321 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 ARL6IP5O75915 188 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 ZNF432O94892 652 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 PTH2RP49190 550 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 RASGEF1BQ0VAM2 473 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 RSPO4Q2I0M5 234 aaPredicted RBP12.83□□□□□ -0.36
PBX3-201ENST00000342287 DNLZQ5SXM8 178 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 FDX2Q6P4F2 183 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 UNQ9370/PRO34162Q6UXP9 181 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 C1QL4Q86Z23 238 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 LINC00346Q8IVM7 164 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 PACRGQ96M98 296 aaPredicted RBP12.83□□□□□ -0.36
PBX3-201ENST00000342287 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 DERL3Q96Q80 235 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 FREM3P0C091 2139 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 SMCO3A2RU48 225 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 ACOT7O00154 380 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 FGF7P21781 194 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 HOXC12P31275 282 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 ATP1B3P54709 279 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 BAP18Q8IXM2 172 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 SEMA6DQ8NFY4 1073 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 PPP1R1CQ8WVI7 109 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 EXO5Q9H790 373 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 KPTNQ9Y664 436 aa12.83□□□□□ -0.36
PBX3-201ENST00000342287 TRAV1-2A0A0B4J238 106 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 TMEM235A6NFC5 223 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 TMEM212A6NML5 194 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 ZNF716A6NP11 495 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 ZNF708P17019 499 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 S100A7P31151 101 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 GUCA1AP43080 201 aaPredicted RBP12.82□□□□□ -0.36
PBX3-201ENST00000342287 CLDN18P56856 261 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 SRYQ05066 204 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 KCNMB1Q16558 191 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 UBE2NLQ5JXB2 153 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 HIST2H3PS2Q5TEC6 136 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 ABLIM2Q6H8Q1 611 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 OR14A2Q96R54 314 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 COMMD4Q9H0A8 199 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 CBLN4Q9NTU7 201 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 LRP12Q9Y561 859 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 FLVCR1Q9Y5Y0 555 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 OR4C45A6NMZ5 311 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 NXPH2O95156 264 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 CDAP32320 146 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 ZNF133P52736 654 aaPredicted RBP12.82□□□□□ -0.36
PBX3-201ENST00000342287 NKX6-1P78426 367 aaPredicted RBP12.82□□□□□ -0.36
PBX3-201ENST00000342287 C10orf128Q5T292 105 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 FCRLAQ7L513 359 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 ZNF610Q8N9Z0 462 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 PIK3IP1Q96FE7 263 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 ZNF845Q96IR2 970 aaPredicted RBP12.82□□□□□ -0.36
PBX3-201ENST00000342287 S100A13Q99584 98 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 KLK13Q9UKR3 277 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 CEP250Q9BV73 2442 aa12.82□□□□□ -0.36
PBX3-201ENST00000342287 A0A1B0GTH9 108 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 GFRA3O60609 400 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 TMEM69Q5SWH9 247 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 ZNF529Q6P280 563 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 TMED4Q7Z7H5 227 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 C20orf196Q8IYI0 205 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 ZNF676Q8N7Q3 588 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 OR2AJ1Q8NGZ0 328 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 OR5R1Q8NH85 324 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 RNF133Q8WVZ7 376 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 ZNF775Q96BV0 537 aaPredicted RBP12.81□□□□□ -0.36
PBX3-201ENST00000342287 C1orf198Q9H425 327 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 LPAR3Q9UBY5 353 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 FOXD3Q9UJU5 478 aaPredicted RBP12.81□□□□□ -0.36
PBX3-201ENST00000342287 STARD10Q9Y365 291 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 EFSO43281 561 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 CEACAM4O75871 244 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 FAM157CP0CG43 387 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 PGAM2P15259 253 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 HNF4GQ14541 408 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 PCGF3Q3KNV8 242 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.81□□□□□ -0.36
PBX3-201ENST00000342287 C4orf45Q96LM5 186 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 ATG5Q9H1Y0 275 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 POLR1DQ9Y2S0 133 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 CSAG2Q9Y5P2 127 aa12.81□□□□□ -0.36
PBX3-201ENST00000342287 PTPRZ1P23471 2315 aaPredicted RBP12.81□□□□□ -0.36
PBX3-201ENST00000342287 ITGB1BP1O14713 200 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms